Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0720 ATGTATGTGATGGGAAGGCCACCTTGCTGCGACAAAATTGGGATCAAGAAGGGACCTTGGACTCCCGAAGAAGACATCATCTTGGTCTCTTATATTCAAGAACACGGACCTGGAAATTGGAGGTCTGTTCCAACCAAGACAGGTCTGATGAGATGCAGTAAGAGTTGCAGGCTTAGATGGACAAACTATCTTCGTCCTGGTATCAAAAGAGGCAACTTCACTGACCATGAGGAGAAGATGATCATCCACCTCCAAGCTCTGCTCGGCAACAGGTGGGCTGCTATAGCTTCATATCTTCCACAGAGGACGGACAACGACATAAAGAATTATTGGAACACCCATTTGAAGAAGAAGCTTAAGAGGCTTCAAACTCGGACTGAGGGTGGTGACGACCAAGAAGACGACTCGTTGTCACAGACCAAGGGGCAGTGGGAGAGAAAGCTTCAAACAGATATCCACATGGCCAAACAGGCTCTGTGTCATGCTCTGTCCCTCGACCAGCCCGCTGAAACCAAAACCGAAACCAAGCCATCCAATCCCATAATCCAGACACCCCCTTACGCTTCAAACACTGAGAACATAGCCCAATTACTTCAGAACTGGATGAAAAAATCCCCAAATCACCCAACACCAGGAGCTCACTTCATCAACATGGGTACGACAGGTTCCAGTTCGTCCAGCGAAACGATGACGTACAATAGCAACAGTAACAACAATGTTCTAGATTCTGTGTGGAGCTTTAACTCTGATACTTCTCCACAATCTGTGTCTGTGGATGAGAACACCAACAACAACATGTTCCAGGACGAGAGCAAGCCGAGCTCTGAGTCGCATCAGCTTCCTCTGACTCTAATCGAGAAGTGGCTCTTTGATGATGGGTTAGCTCAGAACCAGGATGAGGACCTAATCAACGACTCATTAATTCTGGCAGAAACTACTCCTCAAATGTTCTAG 954 0.4717 MYVMGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTKTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKRLQTRTEGGDDQEDDSLSQTKGQWERKLQTDIHMAKQALCHALSLDQPAETKTETKPSNPIIQTPPYASNTENIAQLLQNWMKKSPNHPTPGAHFINMGTTGSSSSSETMTYNSNSNNNVLDSVWSFNSDTSPQSVSVDENTNNNMFQDESKPSSESHQLPLTLIEKWLFDDGLAQNQDEDLINDSLILAETTPQMF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0720 317 FunFam MYB-related transcription factor 16 69 - -
Acco13g0720 317 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Acco13g0720 317 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 245 - -
Acco13g0720 317 MobiDBLite consensus disorder prediction 122 144 - -
Acco13g0720 317 CDD SANT 72 115 IPR001005 -
Acco13g0720 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Acco13g0720 317 Gene3D - 16 69 - -
Acco13g0720 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Acco13g0720 317 CDD SANT 19 64 IPR001005 -
Acco13g0720 317 SMART sant 16 66 IPR001005 -
Acco13g0720 317 SMART sant 69 117 IPR001005 -
Acco13g0720 317 Gene3D - 72 158 - -
Acco13g0720 317 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Acco13g0720 317 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Acco13g0720 317 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Acco13g0720 317 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Acco13g0720 317 FunFam Transcription factor MYB30 71 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0720 Acco-ChrAcco13 5331435 5332564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0720 4 292 MYB Transcription Factor Family AT5G62470 50.872 2.82e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g0720 Myb_DNA-binding 5.4e-15 CL0123