Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0717 ATGGAGGGTGGTGATGATCTCCGCCACCACCACCACCATCACCACCACCGCCCCAACTTCCCATTTCAGCTTCTCGAGAAGAAAGAAGATCACCACCAAGAGCCCGCTGCTTCTTGTTCCACTTCTTCCTCTTATCCTTCTCTAGCCATCTCCGCCGAACCCTCCGCCTCCAATTCCAACCGATCCAACCAGGTCCTTAACGTCGTCCCTCCAACGTCTTCCTCCTCCGAACTCTCCAATAAGAAGCCCCCACCTAAGAGAACCTCCACCAAGGACCGCCACACCAAGGTCGACGGTCGCGGCCGCCGTATCCGAATGCCAGCGCTGTGTGCAGCTCGCGTCTTTCAGCTCACCCGCGAGCTTGGCCATAAGTCCGACGGCGAAACCATTGAGTGGCTCCTCCAACAGGCTGAGCCCTCCGTCATCGCTGCCACCGGCACCGGGACGATCCCCGCTAATTTCACTTCCCTTAATATCTCTCTCAGAAGCTCCGGCTCCACCATGTCCGCCCCTTCTCTGCTCAGATCGTCTTACTTCAATCCAAACTTCTCCATCCACCAGCGGAGAAGCTTTTTCCCCGGAATCGGCTTGTCTTCGGATGGCGGCAACAGCAACACTTCAACGCTGCTGAATTTTCAGTCTAATAGTTTCTCCTCCGGCGGCGGCGGCATGCTGCAAGCAAAGCAGGAATTGCGAGGAGGCAGCGAGGGTGGAGGCGTTCCGTCCTCAACAACAACCACGTTGGATTTGACAGAGGCGGAAGAAGTTATGGCAGCGAGGAAAAGGCGGCCGACGGAGCAAGAGTTGTCGCCATCAACTTCGGCGCAACAATATCAAATGGGAAGTTATTTGTTGCAATCGAGTGCTGGGGCGATTACCACGAGCCACGCACAGATTCCGGCGAATATTTGGATGGTGGCGAATTCGAATAATCAAGTTATGAGCGGTGATCCTATATGGACATTCCCGTCGGTGAATAACAGCGCTTTGTATAGAGGCGCTACCATGTCTAGTGGGTTACATTTTATGAACTTCCCTACTCCCATGGCTTTGTTGCCTGGTCAACAATTAGGGTCGTCTGGGATTGGTGGCGGCGGAGGAGCTGGGAATATAAACGAGGGACATTTGAGTATGCTTGCCGGTCTCAGCCCGTACCGGCCGGTGAGTGGTGTTTCGGAGTCTCAGGCAAGTGGGTCTCAATCACACCACGGTGATGGTGGTGGAGGCGGCGATGATCGACATGATACAAACAGTCACCGCTCCTAG 1266 0.549 MEGGDDLRHHHHHHHHRPNFPFQLLEKKEDHHQEPAASCSTSSSYPSLAISAEPSASNSNRSNQVLNVVPPTSSSSELSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTMSAPSLLRSSYFNPNFSIHQRRSFFPGIGLSSDGGNSNTSTLLNFQSNSFSSGGGGMLQAKQELRGGSEGGGVPSSTTTTLDLTEAEEVMAARKRRPTEQELSPSTSAQQYQMGSYLLQSSAGAITTSHAQIPANIWMVANSNNQVMSGDPIWTFPSVNNSALYRGATMSSGLHFMNFPTPMALLPGQQLGSSGIGGGGGAGNINEGHLSMLAGLSPYRPVSGVSESQASGSQSHHGDGGGGGDDRHDTNSHRS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0717 421 ProSiteProfiles TCP domain profile. 90 144 IPR017887 -
Acco13g0717 421 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 405 IPR005333 GO:0003700
Acco13g0717 421 MobiDBLite consensus disorder prediction 220 250 - -
Acco13g0717 421 MobiDBLite consensus disorder prediction 25 98 - -
Acco13g0717 421 MobiDBLite consensus disorder prediction 406 421 - -
Acco13g0717 421 MobiDBLite consensus disorder prediction 36 83 - -
Acco13g0717 421 Pfam TCP family transcription factor 88 206 IPR017887 -
Acco13g0717 421 MobiDBLite consensus disorder prediction 388 402 - -
Acco13g0717 421 MobiDBLite consensus disorder prediction 386 421 - -
Acco13g0717 421 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0717 Acco-ChrAcco13 5283822 5285087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0717 75 415 TCP Transcription Factor Family AT3G47620 41.204 8.37e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco13g0717 TCP 3.1e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0717 13 5283822 5285087 Acco13g0717 13 5283822 5285087 ECH