Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0712 ATGAATTCCTCCAAATTCGTCCATGGCTATGGCAAAGTATCTGATCACCTCGAAGATCAGCCCTCTTTGCCCACATCCCCCAATCGCAAGCCCCTTGTCGCCTTCATTTCTGTTTTAGCCATCCTCTTCCTTACTCTCTCTCTCGGTGTCACGCTCGGAGCTCTCATCCATAACTCCAATTCCCGACCACGATCAACTCCTTCCACCCCCAATACCGGCGTCGCCGCCTCCATCAGAACCGTCTGCAACGTCACGCGCTTCCCGGCCTCCTGCTACTCAAGTATTTCCTCCCTCACCACTTCCCTCCAAAACCCTAACGACCCTGAATCCATTCTCAAGCTTTCTCTTCGTGTTTCCCACGAAGAACTCTCTAAGCTGTCGTCCTCCCTCAGAACCTTGGCTTCCACCTCCAACTCGCCCGCTCTCTCTGATTGTAAGGATCAGATCGATGACGCGATGAGTCGACTCAACGACTCGCTGTCGGCGATGGATGTGGCTCCCGGTGACAAGGCGTTGACTGATGCGAAGATCAACGACATACAGACCTGGATCAGCGCGGCGGTGACGGACCAGGAAACGTGTTTGGATGGATTGGAGGAGACAGAGTCGGCGGCGCTGGGGGAGATGAAGGTGAAGATGCAGAGGTCGAGGGAGTACACAGGCAACAGCTTAGCCATAGTTGCCAACATTCGCATCTTACTGCAACGCTTCAATATGTCCCTCCATTGA 729 0.5391 MNSSKFVHGYGKVSDHLEDQPSLPTSPNRKPLVAFISVLAILFLTLSLGVTLGALIHNSNSRPRSTPSTPNTGVAASIRTVCNVTRFPASCYSSISSLTTSLQNPNDPESILKLSLRVSHEELSKLSSSLRTLASTSNSPALSDCKDQIDDAMSRLNDSLSAMDVAPGDKALTDAKINDIQTWISAAVTDQETCLDGLEETESAALGEMKVKMQRSREYTGNSLAIVANIRILLQRFNMSLH 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0712 242 PANTHER PECTINESTERASE INHIBITOR-LIKE 40 223 - -
Acco13g0712 242 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 229 IPR035513 -
Acco13g0712 242 SMART PMEI_2 73 226 IPR006501 GO:0004857
Acco13g0712 242 FunFam Pectinesterase 74 231 - -
Acco13g0712 242 CDD PMEI-like_3 80 230 - -
Acco13g0712 242 MobiDBLite consensus disorder prediction 1 25 - -
Acco13g0712 242 Pfam Plant invertase/pectin methylesterase inhibitor 77 226 IPR006501 GO:0004857
Acco13g0712 242 NCBIfam pectinesterase inhibitor domain 68 229 IPR006501 GO:0004857
Acco13g0712 242 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0712 Acco-ChrAcco13 5246725 5247453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0712 63 242 Carbohydrate Esterase AT1G53840 42.188 1.09e-35 131