Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0711 ATGTCTGGCAAAAAAAGTTGCAGAGCTTCAAACTTGAACGAGAATGACATCAATGATCTCGTGTCGAGGTTACAAGCACTTCTGCCTCGCCTGAACCGCAGGACTGACTCAAGGGTATCAGTGTCAAAGATATTGAAAGAAACTTGCAGTCACATCAAGAAGCTACAGAAAGAGGTGGAAGAGCTGAGTGAAAGGGTAATAGAGCTGATGGAATCTGCTGATATTAGGGAAATAGACGAGGAGAGTCTTAGAAGATTGTTGCTACGTTGA 270 0.4333 MSGKKSCRASNLNENDINDLVSRLQALLPRLNRRTDSRVSVSKILKETCSHIKKLQKEVEELSERVIELMESADIREIDEESLRRLLLR 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0711 89 SMART finulus 11 61 IPR011598 GO:0046983
Acco13g0711 89 Gene3D - 14 86 IPR036638 GO:0046983
Acco13g0711 89 PANTHER DNA BINDING PROTEIN 5 87 IPR044172 -
Acco13g0711 89 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 72 IPR036638 GO:0046983
Acco13g0711 89 Coils Coil 45 72 - -
Acco13g0711 89 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 55 IPR011598 GO:0046983
Acco13g0711 89 Pfam Helix-loop-helix DNA-binding domain 15 56 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0711 Acco-ChrAcco13 5243820 5244388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0711 1 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 49.367 8.20e-17 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco13g0711 HLH 4.2e-06 No_clan