Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0708 ATGGGAAATTGCTTGGGTTCTCGTCCCGGGTTTGATTACAGTCGAACCTCCCATCAAACCTATGAAGTTGCTGGTAGAAGCACCCCTTCCTGTTTAAGTCAATCAGTTTTTGAATACAAGAACAACGATAAATTTCAGACTCTCTGGGCCTCAAGATCTGAAGGTGATATACTTTCCTCGCCAAATTTGAAGGCCTTCACATTTAATGAACTTAGAAATGCTACTAGGAACTTTGGTCCTGAGAGTCTAATAGGACAAGGAGGCTTTGGTGATGTCCACAAGGGGTGGATTGATGAGCAATCCTTTAGTGCTACTAAGCCCGGGTCCGGAATGGTTGTGGCCGTGAAGAAGTTGAAACCTGAAGGTTTTCAAGGGCATAAGGAGTGGCTGTCTGAAGTCAATTATCTTGGCCAACTTCATCATCCAAATGTTGTCAAACTTATTGGATACTGCCTACATGGAGATAATCGACTTTTAGTATATGAGTACTTGCCCAAAGGAAGCTTGGAGAACCATCTATTTCGCAGGGGCTCACAGTCTCTTTCATGGGCAACAAGGATCAAAGTTGCCGTTGATGCTGCTCGTGGTCTTGCCTTCCTACACGACTCCAATCCACAAGTTATCTACCGTGATTTTAAGGCTTCCAATGTATTATTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGTTTGGCTAAAGCAGGACCAACTGGTGATCGTTCTCATGTTTCAACTCAAGTCATGGGTACTCACGGCTATGCTGCTCCTGAATATATTGCTACAGGTCGGCTAACGACAAAGTGTGATGTCTATAGCTTTGGGGTTGTGCTTTTCGAGCTTCTATCAGGGCGTTGTGTCATCGACAAAACAAAATCTAGAGTGGAACAAAATCTGGTGGAATGGGCAAAAGCGGCCTTTTTGGGCGATAGGAGAAAGCTTTTCAGGATTATGGACACCAAGTTAGAAGGCCAGTACCCACAGAGGGCTGCTTATGCAGCTGCAATCCTTGCACTACAGTGCATTAGTGAGGCCAGAATCAGGCCCCAGATGTCTGAGGTCGTGGCTACGTTAGAACAGCTTCTAGTCAGCAGATCGTCCAGCCGGAGCCGGATGTCTGTCCCTTCTTCTACAGGGAACTCACTTTTGGGAAATGTTCATTGTTTAACAGAGAGCAGGTCATCGCACTTGTTCAATGACAAGAAATCCAGTTTCAGTTTCAGACGTGGAGAAACTAAAGACACCACTAATGGCGAGCTTTCTTGGGAGTTTGAGCAACATGAGAAGGAATTTAATGTCGAGTTTGGGATAAACTATAAGAAAGATAGCGCTGACCTGGAGCGCATAAGACAACACTTAGAATCTGAGCAAAAGAAAGGAAAGGGTCATGGAGAACTTGCACAAGTTATGCAGCAGCAATCAGAGCAGGAACTGACGAGTAAAGTTATGCAGCAACAAGAACTGATGAGAAAAGTTATTCAACAAGAAGTAAAAGAGGAACTGAGGAAATTGAATCTTCCTCATAGTTATCATTTTAGTTATCGGCCTTCAATTACATTCGCTTCCACATAA 1572 0.4383 MGNCLGSRPGFDYSRTSHQTYEVAGRSTPSCLSQSVFEYKNNDKFQTLWASRSEGDILSSPNLKAFTFNELRNATRNFGPESLIGQGGFGDVHKGWIDEQSFSATKPGSGMVVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNVVKLIGYCLHGDNRLLVYEYLPKGSLENHLFRRGSQSLSWATRIKVAVDAARGLAFLHDSNPQVIYRDFKASNVLLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVMGTHGYAAPEYIATGRLTTKCDVYSFGVVLFELLSGRCVIDKTKSRVEQNLVEWAKAAFLGDRRKLFRIMDTKLEGQYPQRAAYAAAILALQCISEARIRPQMSEVVATLEQLLVSRSSSRSRMSVPSSTGNSLLGNVHCLTESRSSHLFNDKKSSFSFRRGETKDTTNGELSWEFEQHEKEFNVEFGINYKKDSADLERIRQHLESEQKKGKGHGELAQVMQQQSEQELTSKVMQQQELMRKVIQQEVKEELRKLNLPHSYHFSYRPSITFAST 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0708 523 SUPERFAMILY Protein kinase-like (PK-like) 51 358 IPR011009 -
Acco13g0708 523 FunFam Serine/threonine-protein kinase PBS1 164 376 - -
Acco13g0708 523 Coils Coil 483 503 - -
Acco13g0708 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Acco13g0708 523 Gene3D Transferase(Phosphotransferase) domain 1 164 377 - -
Acco13g0708 523 PANTHER OS01G0588500 PROTEIN-RELATED 45 361 - -
Acco13g0708 523 Pfam Protein tyrosine and serine/threonine kinase 83 296 IPR001245 GO:0004672|GO:0006468
Acco13g0708 523 ProSitePatterns Protein kinases ATP-binding region signature. 84 117 IPR017441 GO:0005524
Acco13g0708 523 Gene3D Phosphorylase Kinase; domain 1 50 163 - -
Acco13g0708 523 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0708 523 FunFam Serine/threonine-protein kinase BIK1 46 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0708 Acco-ChrAcco13 5206264 5212591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0708 40 375 Glycoside Hydrolase AT3G07070 50.588 3.44e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco13g0708 PK_Tyr_Ser-Thr 7.1e-47 CL0016