Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0704 ATGCCATCGCTGCTTTCTTCTTCGTTTTTTTTTTTTTTTGCCCCTCTCTTTCTTGGTTTTCAAGCTCTCTCTGTTTCATGGAATGGTGGATTTGAGGTGAAGAGGTTCAGCATTTGCCGGTCCATTGGAAGTCCTGAACTATGTTGCAGTTGCTTGTGTTATCCTGATGTTAACGTTCTTCTAAACGTTTTACAGTACTTTCGGAGTAATTGTCCTGTTCTCACAATGGGCAAGTCACCAGGAAAATGGATCAAAACTGTACTATTTGGAAAAAAGTCATCCAAATCAAATATTTCCAAAGGAAGAGAGAAACTCATTAACCAGAAAGAAGCATTGGTTGTGCCCAAGGCACCAGAAACTGGTGTGGCTGTACAACCACCATCATATACTGTCGCCAGAGACGAGGAAGAGTTGGAATTGGAGAATAAAGAACCAGAAAATCTTTCTCCTGTGAATCAGGAAACTGATTCGGTGTCACATGTTCATGAAGATGCACCGCCTGATCTGGAGAAAATCAGGCAGGTGGAAGCTGCAACAAAGGCGCAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGGATAATAAGATTGCAGGCACTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACATTATGTTCCATGTATGGGATAGTCAAATTCCAGGCAGTTGTTCGTGGAGGGAGGGTTAGACAGTCTCATGCTGGTTATGAAATCCATGAGAAGTACAATATGTTGAAGCTTCAGGATGGAAAACGTGCCAACCCAGTTGATATAGCCACAAAATTTGCAAAGCTATCAACGAATACTTACACCCGCAAGCTTCTCGCCTCATCTACTACAATAATGGCCTTGCGCCTGCAATATGTTCCTGGTGATCCGAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCTGCATATCACTTTTGGATACCGATTCCCCAACCCAAGAAAATTCCAGATTCTAGGTCTCGAAGAAAGCAAGGTAATACTTCAACTGGAGAAGTTCAAATGAGCAAGTCGAGACGCACTAACCGGAAGGTTCCAAGTGTAAATTCTGAATCAGTCCCAGTACAAGCAAATCCTGAATTGGAGAAACCAAAACGAAACCTGAGGAAATTATCTAACCAAGCTGCAGAGTCAATGCAAGAAAATCCACAAAGTGAACTTGAAAAGGTTAAGCGGAGCCTGAGAAAGGTCCATAACCCCATTGTTGAGAATGCTGTTCCACCAGAAGTTGAGTCTGAGACCCCAAAACAGAACGTGGAAAAGGCAAATATTACCTCAGGACATATTGTTTCAGAGCAAGAGGTTGTTAGCTCTAACGAAATACCTAACAAACAACCAGCATTAGCTGAGCCCGTGCCCAGTGTACCTGATGTGGAAATTACTCCTAGACCTTCAGTTAGCAAGGAGGCGTCTGAAATGTCAGGTAGCTATCAAGTGGAACTGGATCCAAAGCCCTTGGTAGAGAATACAAGTCAAGATAGAAATACTTCTGGTGACGGAGCTTTAAATGAGCCAAAAGATCTACCAGAGGGTGGGTGTAAAGATGAAAATTCTCCAGTAACAAATGGGGATCTGAATCATAAGGAAGATACAACGGGCAATGAAAACCAGAGACCCTCCCGGCGAGCCACAGTTCAAGGAAAACAGGAACGTTCAGAGAATGGTGTACAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACTGAGTCAGCCAAGGCTAAGTTGAGGGCACAAGGATCACCAAGGTTGGGACAAGATAGTGGTGAGAGAAACAACTCTGCACGGCGACATTCATTGCCATCCTCTACTAACAGCAAAATTAGTTCACATTCACCAAGGACGCAGAGACCAGTTCAACCAGGCAGCAAAGGTGGGCACAAAGCTGTATCATCTAGAGATGGAAACGGAAGAGTAATTCAAGCCGAGTGGAAGAGGTGA 1974 0.4407 MPSLLSSSFFFFFAPLFLGFQALSVSWNGGFEVKRFSICRSIGSPELCCSCLCYPDVNVLLNVLQYFRSNCPVLTMGKSPGKWIKTVLFGKKSSKSNISKGREKLINQKEALVVPKAPETGVAVQPPSYTVARDEEELELENKEPENLSPVNQETDSVSHVHEDAPPDLEKIRQVEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQAVVRGGRVRQSHAGYEIHEKYNMLKLQDGKRANPVDIATKFAKLSTNTYTRKLLASSTTIMALRLQYVPGDPNSVLSWLERWSAYHFWIPIPQPKKIPDSRSRRKQGNTSTGEVQMSKSRRTNRKVPSVNSESVPVQANPELEKPKRNLRKLSNQAAESMQENPQSELEKVKRSLRKVHNPIVENAVPPEVESETPKQNVEKANITSGHIVSEQEVVSSNEIPNKQPALAEPVPSVPDVEITPRPSVSKEASEMSGSYQVELDPKPLVENTSQDRNTSGDGALNEPKDLPEGGCKDENSPVTNGDLNHKEDTTGNENQRPSRRATVQGKQERSENGVQSSPTLPSYMAATESAKAKLRAQGSPRLGQDSGERNNSARRHSLPSSTNSKISSHSPRTQRPVQPGSKGGHKAVSSRDGNGRVIQAEWKR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0704 657 Gene3D - 172 220 - -
Acco13g0704 657 ProSiteProfiles IQ motif profile. 198 225 IPR000048 GO:0005515
Acco13g0704 657 MobiDBLite consensus disorder prediction 334 367 - -
Acco13g0704 657 MobiDBLite consensus disorder prediction 428 455 - -
Acco13g0704 657 MobiDBLite consensus disorder prediction 596 630 - -
Acco13g0704 657 MobiDBLite consensus disorder prediction 415 657 - -
Acco13g0704 657 MobiDBLite consensus disorder prediction 326 378 - -
Acco13g0704 657 SMART iq_5 196 217 IPR000048 GO:0005515
Acco13g0704 657 SMART iq_5 173 195 IPR000048 GO:0005515
Acco13g0704 657 MobiDBLite consensus disorder prediction 548 577 - -
Acco13g0704 657 PANTHER IQ-DOMAIN 5-RELATED 76 620 - -
Acco13g0704 657 MobiDBLite consensus disorder prediction 135 163 - -
Acco13g0704 657 Pfam IQ calmodulin-binding motif 176 195 IPR000048 GO:0005515
Acco13g0704 657 Pfam IQ calmodulin-binding motif 198 215 IPR000048 GO:0005515
Acco13g0704 657 ProSiteProfiles IQ motif profile. 174 202 IPR000048 GO:0005515
Acco13g0704 657 Pfam Protein of unknown function (DUF4005) 559 636 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0704 Acco-ChrAcco13 5186344 5192522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0704 76 657 IQD Protein Family AT1G74690 44.861 1.25e-127 387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2704 04 43851226 43856373 Acco13g0704 13 5186344 5192522 ECH
Acco13g0704 13 5186344 5192522 Acco13g0704 13 5186344 5192522 ECH