Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0700 ATGGAGTTTTCTCTGCGCAGATCTGGTGGCCAAGAAGGTGAAGCAGTCAAGGAAGAGAAGACGATTAGTGAATCTACTACTCCTGCTCATAATCATCCTGAAGCTCCTCCTCATCTTATTAAACAAGATTCTACAGTTGCCCAGGTGCCACCCATGAATACTACTGATAGATCCGTCGAGGACACTTCTGGACCACCTCAAGCATCCTCAGACAAAAAGGAAGAGGTTGATGAACTTGAATCGGCAAGAGTTGAAATGGGGGAGGTGAGAGAAGAAAACCAAAGGCTAAAGATGTGTTTGGAGAGAATAATGAAGGAATACCAGGAGCTGCAAATGCAATTCCACGTTATAGCTCAACAAGAAGCAGCAACCACGAAATCTTGTGGTGATCAAAAACCAAATAATATTGTTAACAATCAAGAAGCAGCTCCTGATGAGGAATCAGATCTGGTCTCACTCAGTCTTGGACGAGTTCCAGCTAGTAGTAACGAAAAATCTAAAGTCATGAGCTCCAAATCATCATTACAATTACAGCGACAAGAAGAAGAAGACTTGGCTCTTGGACTGGATTGCAAATTTGAAACATCAAAATCTGGAAGCACAACAGAAGCATTGCCAAATAATAATGGAAGCCCCACCAATAGCTCTGCATTAGTGCACAAGGAAGAAGAAGCGGGAGAGAGTTGGCCACCAAGTAAAACACTTATTAATAAATCTCCCAGAGATTCTTCCACAGATCAAGATGAAGTTTCCCAACAAAATCCTGCTAAGAAGGCCCGAGTTTGCGTCAGGGCAAGATGTGACACCCCAACATTGAATGATGGATGCCAATGGAGGAAGTATGGACAGAAAATATCCAAGGGAAATCCTTGTCCAAGAGCTTACTATCGCTGCACAGTTGCACCAAATTGTCCAGTAAGAAAGCAGGTGCAAAGATGTGTAGAGGACATGTCGGTTCTAATCACTACCTATGAAGGAAACCACAACCACCCTCTTCCTCTCTCTGCTACTGCCATGGCTTCCACCACCGCTGCTGCTGCTTCCATGCTCTTGTCCGGCTCATCTTCAACATCCAATAATTCCACTAGTTTCTTACCGTCTTTAACGGCCACCGCCTCCGCCACCATTGGCTCTGAACTCCCCGGCGGCATCAACTTCTACCTCTCAGATGGCTCCAAACCAAAGCAATTCTACCTGTCAAATCCAGCACTATCACCTTCACCATCACACCCAACAATTACCATCGACCTCACTTCCAATCCTTCCTCTTCAAATTATTTCTCCTCGTCCCACATCAACAGATTCAACTCATCAAACTACAACCACCCTCCCAGATTCCCTTCTTCAACAACCAGTCTCAGCTTTGGTTCCTCAGACTCCAACACAATGCCGTGGAGCAACAATAATGTGGGCTTCCTGGGTTACAACTATAACACTCAACCATATAATAATAATAACAGAAACATCCTCGGCAGCAACAACCTCGGAAGACAACTACCGATTCAAACTCCTCCTCCTCAAGTTCATCAAAATCCTTCACTGCCAGACACCATAGCTGCAGCAACTAAAGTGATCACAGCTGACCCAACTTTTCAGTCAGCTTTGGCTGCTGCGCTTACTTCCATTATCGGCACAGGAAATAATAATAATTATAGTGCTAATGGTGTTAGTGGGAATAGCACACAAGGTGTTGGAGAAATCAACTTGGGTCAGAAAATTAACCAGTGGGGAGATATTTTTGCAGCTTCTTCTGCATCTGGTGGGTCTGCTTCTAATAAAGTCAGTGGATGTGGTTCAAGCTTCTTGAGTAAAACGACGACGACGCCGGCAGCCGGAACACAAGCAGCTGGAAGTAGCGGCTTGATGTTTCTGCCTCCACCTTTGCCATTTTCTTGCTCCAAGACCGCGTCTGCGTTATCTCCGAAAGATAATAGAGACAAGTCCAACTCGTGA 1953 0.4501 MEFSLRRSGGQEGEAVKEEKTISESTTPAHNHPEAPPHLIKQDSTVAQVPPMNTTDRSVEDTSGPPQASSDKKEEVDELESARVEMGEVREENQRLKMCLERIMKEYQELQMQFHVIAQQEAATTKSCGDQKPNNIVNNQEAAPDEESDLVSLSLGRVPASSNEKSKVMSSKSSLQLQRQEEEDLALGLDCKFETSKSGSTTEALPNNNGSPTNSSALVHKEEEAGESWPPSKTLINKSPRDSSTDQDEVSQQNPAKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPNCPVRKQVQRCVEDMSVLITTYEGNHNHPLPLSATAMASTTAAAASMLLSGSSSTSNNSTSFLPSLTATASATIGSELPGGINFYLSDGSKPKQFYLSNPALSPSPSHPTITIDLTSNPSSSNYFSSSHINRFNSSNYNHPPRFPSSTTSLSFGSSDSNTMPWSNNNVGFLGYNYNTQPYNNNNRNILGSNNLGRQLPIQTPPPQVHQNPSLPDTIAAATKVITADPTFQSALAAALTSIIGTGNNNNYSANGVSGNSTQGVGEINLGQKINQWGDIFAASSASGGSASNKVSGCGSSFLSKTTTTPAAGTQAAGSSGLMFLPPPLPFSCSKTASALSPKDNRDKSNS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0700 650 FunFam probable WRKY transcription factor 31 257 334 - -
Acco13g0700 650 MobiDBLite consensus disorder prediction 67 92 - -
Acco13g0700 650 Gene3D WRKY domain 256 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco13g0700 650 SMART WRKY_cls 272 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g0700 650 Pfam WRKY DNA -binding domain 273 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g0700 650 MobiDBLite consensus disorder prediction 125 142 - -
Acco13g0700 650 MobiDBLite consensus disorder prediction 11 25 - -
Acco13g0700 650 ProSiteProfiles WRKY domain profile. 267 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g0700 650 SUPERFAMILY WRKY DNA-binding domain 265 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco13g0700 650 MobiDBLite consensus disorder prediction 125 181 - -
Acco13g0700 650 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 59 552 IPR044810 GO:0003700
Acco13g0700 650 MobiDBLite consensus disorder prediction 196 218 - -
Acco13g0700 650 MobiDBLite consensus disorder prediction 1 92 - -
Acco13g0700 650 MobiDBLite consensus disorder prediction 232 254 - -
Acco13g0700 650 MobiDBLite consensus disorder prediction 196 257 - -
Acco13g0700 650 CDD bZIP 72 106 - -
Acco13g0700 650 MobiDBLite consensus disorder prediction 46 66 - -
Acco13g0700 650 Coils Coil 72 113 - -
Acco13g0700 650 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0700 Acco-ChrAcco13 5143533 5147452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0700 86 545 WRKY Transcription Factor Family AT5G15130 41.949 9.00e-83 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco13g0700 WRKY 1.4e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2699 04 43793163 43796796 Acco13g0700 13 5143533 5147452 ECH
Acco13g0700 13 5143533 5147452 Acco13g0700 13 5143533 5147452 ECH