Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0685 ATGAAGCACGCGGTGCATGCTGTTGGACGTGGTAGCATATCATCCCAAGCAAGATTAGCCAGCAAATGCTTTGTGGGATTCTTTCGGACTGCCGTTACTGATTACGACTCCATTATACAGAACACAGTGCTTCTTCTTGGGTTGTTCTATTTTCTGCCACCTCTCGCCGCTTGCCATTTTTCTGAACGGTTTCGCAGTCAGATAGAAAGTTGGATAAGAAGAGTGAGCGGTACTGGGAGGAGGAGGAGGAGAGAAGAAGAGATGGGGGACAAGTCTCAAGTATTGGAGGCTGTGTTGAAGGAAGCTGTGGATTTGGAAAATATACCCATTGAGGAAGTTTTTGAGAATCTAAGATGTAGCAGAGAAGGTCTCACCTCTGTGGCTGCTGAGGAGAGGCTCACCATCTTCGGTCATAACAAGCTTGAAGAGAAAAAGGAGAGCAAATTTTTGAAGTTCTTGGGTTTTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTGCTGCCATAATGGCAATTGCGCTTGCAAATGGAGGGGGGAAGCCACCTGATTGGCAAGACTTTGTGGGTATCATCACTCTGCTTATCATCAACTCAACTATTAGTTTCATCGAGGAAAACAATGCGGGTAATGCTGCTGCCGCTCTCATGGCTCGTCTTGCTCCCAAAGCGAAGGTTCTTCGAGATGGTAGGTGGACTGAGCAAGATGCTGCGGTCCTGGTTCCAGGTGATATCGTCAGTATTAAACTGGGAGATATTATACCAGCTGACGCTCGTCTTCTTGAAGGGGATCCTCTGAAAATAGATCAGTCTGCACTTACAGGTGAGTCCTTGCCAGTGACAAAAGGTCCTGGTGATGGTGTGTACTCTGGTTCTACCTGCAAACAAGGAGAGATTGAGGCTGTGGTCATTGCCACTGGTGTGCATACCTTCTTTGGAAAAGCTGCTCACCTTGTAGATACCACTAATCAAGTGGGTCACTTCCAAAAGGTCTTGACTGCGATTGGGAACTTTTGCATATGTTCAATTGCTGTGGGGATGATTATTGAGATTATTGTTATGTATCCAATCCAAGACCGACAGTACCGTCCGGGAATCGATAACCTTCTTGTACTTCTCATTGGAGGAATTCCAATTGCCATGCCCACAGTTCTTTCAGTGACCATGGCTATTGGTTCTCACAGGTTATCTCAGCAGGGAGCTATCACTAAGAGGATGACAGCCATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAAACTGGGACTCTAACTTTAAACAGGCTAACTGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATCCGGATACTGTTGTTTTGATGGCAGCTCGAGCTTCTAGACTTGAGAATCAAGATGCAATAGATTCTGCCATAGTTGGGATGCTGGCTGATCCAAAAGAGGCAAGAGTGGGAATCCAAGAAGTACATTTTCTTCCTTTCAATCCTACTGATAAGAGGACCGCATTAACTTACATTGATGGTGAAGGTAAAATGCATAGGGTAAGCAAAGGTGCGCCAGAGCAGATTCTCAATCTTGCACACAATAAGTCAGATATTGGACGCAGAGTCCATGCAGTGATAGATAAGTTTGCAGAGCGCGGTCTACGATCTCTTGCTGTAGCATACCAGGAAGTTCCAGAAGGAAGGAAGGAGAGTGCTGGAGGCCCATGGCAGTTCATCGGACTTATGCCTCTCTTTGACCCACCAAGGCATGACAGTGCAGAAACAATACGGAGGGCCCTAAACCTCGGAGTAAATGTCAAAATGATTACAGGTGATCAACTAGCTATAGGAAAGGAGACTGGCCGTCGTTTGGGAATGGGGACCAACATGTATCCCTCATCTGCGTTGCTTGGTCAGGATAAGGATGAGTCCATTTCTGCACTACCCATTGATGAATTGATAGAAAAAGCTGATGGATTTGCTGGTGTTTTTCCTGAACACAAGTATGAGATCGTGAAACGGTTGCAAGCGAGGAAACATATTTGTGGAATGACTGGTGATGGAGTAAATGATGCACCTGCTCTTAAAAAGGCTGACATCGGTATAGCTGTTGCTGATGCAACTGATGCCGCTCGTAGTGCGTCTGATATTGTTTTAACAGAACCCGGCCTTAGTGTTATTATTAGCGCTGTTTTGACCAGCCGAGCCATCTTCCAGAGAATGAAAAATTATACAATTTATGCAGTCTCAATCACTATCCGTATTGTGCTTGGTTTCATGTTGCTGGCCCTCATATGGAGGTTTGATTTTCCTCCTTTTATGGTGCTAATCATCGCCATCCTAAATGATGGTACTATCATGACAATCTCAAAAGATAGAGTAAAACCCTCTCCTCTGCCTGATAGCTGGAAGCTCACAGAGATATTTACCACTGGCATTGTACTTGGAAGTTACTTGGCAATGATGACAGTGATATTCTTTTGGGCAGCATACAAAACAAATTTCTTCCCGCGAGTATTTGGGGTCTCATCTCTTGAAAAAACCGCTCATGATGATTTCCGAAAACTAGCCTCGGCGATATATCTTCAAGTGAGCACTATCAGTCAGGCCCTTATATTTGTTACTCGGTCTCGAGGCTGGTCATATGTTGAGCGCCCTGGTATACTGTTAGTGACTGCTTTTGTGGTTGCTCAGCTGATTGCCACTTTGATTGCAGTATATGCAAACTGGAGCTTTGCTGCAATTGAAGGAATCGGTTGGGGTTGGGCAGGAGTAATATGGTTGTACAACATCATATTTTACATCCCCCTTGATTTCATCAAGTTCTTCATTCGTTATGCTTCGAGTGGGAGAGCTTGGGATCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAGAAGGACTTTGGGAAGGAGCAAAGGGAACTTCAGTGGGCACATGCTCAGAGAACCTTACATGGATTACAAGTACCTGACACCAAGTTCTCCGACCGCACTCATTTCAATGAACTCAATCAAATGGCTGAAGAAGCTAAAAGGAGAGCTGAAATCGCAAGGTTAAGAGAATTGCATACGCTAAAAGGTCATGTAGAATCAGTTGTGAGATTGAAGGGGCTTGACATTGACACAATTCAGCAAGCCTACACAGTCTAG 3129 0.4487 MKHAVHAVGRGSISSQARLASKCFVGFFRTAVTDYDSIIQNTVLLLGLFYFLPPLAACHFSERFRSQIESWIRRVSGTGRRRRREEEMGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSREGLTSVAAEERLTIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWTEQDAAVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRQYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDKNLIEVFAKGVDPDTVVLMAARASRLENQDAIDSAIVGMLADPKEARVGIQEVHFLPFNPTDKRTALTYIDGEGKMHRVSKGAPEQILNLAHNKSDIGRRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWRFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLTEIFTTGIVLGSYLAMMTVIFFWAAYKTNFFPRVFGVSSLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLVTAFVVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYASSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQVPDTKFSDRTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0685 1042 FunFam Plasma membrane ATPase 221 305 - -
Acco13g0685 1042 SUPERFAMILY HAD-like 414 724 IPR036412 -
Acco13g0685 1042 ProSitePatterns E1-E2 ATPases phosphorylation site. 420 426 IPR018303 -
Acco13g0685 1042 Gene3D - 991 1042 - -
Acco13g0685 1042 Gene3D - 430 577 IPR023299 GO:0000166
Acco13g0685 1042 FunFam Plasma membrane ATPase 430 577 - -
Acco13g0685 1042 PRINTS H+-transporting ATPase (proton pump) signature 649 665 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0685 1042 PRINTS H+-transporting ATPase (proton pump) signature 677 693 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0685 1042 PRINTS H+-transporting ATPase (proton pump) signature 708 733 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0685 1042 PRINTS H+-transporting ATPase (proton pump) signature 853 874 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0685 1042 PRINTS H+-transporting ATPase (proton pump) signature 534 552 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0685 1042 PANTHER CALCIUM-TRANSPORTING ATPASE 106 976 - -
Acco13g0685 1042 Coils Coil 993 1013 - -
Acco13g0685 1042 NCBIfam HAD-IC family P-type ATPase 652 766 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0685 1042 NCBIfam HAD-IC family P-type ATPase 190 453 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g0685 1042 FunFam ATPase 4 plasma membrane-type 662 908 - -
Acco13g0685 1042 SMART Cation_ATPase_N_a_2 104 176 IPR004014 -
Acco13g0685 1042 Pfam Cation transporter/ATPase, N-terminus 107 170 IPR004014 -
Acco13g0685 1042 Gene3D - 221 305 - -
Acco13g0685 1042 SFLD p-type atpase 400 728 IPR044492 -
Acco13g0685 1042 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 939 IPR023298 -
Acco13g0685 1042 Gene3D - 183 908 - -
Acco13g0685 1042 SUPERFAMILY Calcium ATPase, transduction domain A 221 318 IPR008250 -
Acco13g0685 1042 FunFam Plasma membrane ATPase 571 725 - -
Acco13g0685 1042 Pfam haloacid dehalogenase-like hydrolase 414 691 - -
Acco13g0685 1042 NCBIfam plasma-membrane proton-efflux P-type ATPase 123 899 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco13g0685 1042 PRINTS P-type cation-transporting ATPase superfamily signature 594 604 - -
Acco13g0685 1042 PRINTS P-type cation-transporting ATPase superfamily signature 418 432 - -
Acco13g0685 1042 PRINTS P-type cation-transporting ATPase superfamily signature 677 696 - -
Acco13g0685 1042 PRINTS P-type cation-transporting ATPase superfamily signature 700 712 - -
Acco13g0685 1042 PRINTS P-type cation-transporting ATPase superfamily signature 268 282 - -
Acco13g0685 1042 PRINTS P-type cation-transporting ATPase superfamily signature 572 583 - -
Acco13g0685 1042 Gene3D - 415 714 IPR023214 -
Acco13g0685 1042 CDD P-type_ATPase_H 123 934 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco13g0685 1042 SFLD C1.7: P-type atpase like 400 728 - -
Acco13g0685 1042 Pfam E1-E2 ATPase 219 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0685 Acco-ChrAcco13 5002587 5008828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0685 88 1042 Primary Pumps ATPases AT5G62670 92.782 0.0 1790