Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0682 ATGGGAAATTGCTGCGTGAAAGCAGATGTCATAGAAAAGTCTAACCACGACTCTAACCAGGCAGCCAAGAAGAAAAACAAGGAAGGAAGACCGAATCCATTTTCAGAAGAACCTATCCATTCGACGGCTCCGATCCGGGTCTTGAAGGACGTGATTCCACTGAGTCACCGAACCCGAATCAGCGACAAGTACGTACTAGGTCGAGAGCTGGGTCGAGGAGAGTTTGGGATCACCTACCTATGTACGGACCGAGAGACGAAGGAAGCACTAGCTTGTAAGTCGATTTCGAAACGGAAGCTGAGGACGGCGGTGGATATTGAGGATGTGAGGCGCGAGGTTGCTATAATGTCCACTTTACCGGATCATCCTAACATCGTGAAGCTCAAGGCTACCTACGAGGACAACGAAAACGTGCACCTTGTGATGGAGCTGTGCGAGGGCGGCGAGCTTTTTGATCGGATTGTGGCTAGAGGACATTACAGCGAACGAGCGGCGGCGAGCGTGGCCAGAACAATTGCAGAGGTTGTAAAGATGTGCCATGCCAACGGGGTTATGCATAGGGACCTGAAGCCTGAGAACTTCCTTTTCGCTAATAAGAAAGAGAACTCTGCTCTCAAAGCCATCGATTTTGGGCTCTCTATCTTTTTCAAGCCTGGAGAGAAGTTCTCGGAGATTGTTGGGAGTCCTTACTATATGGCGCCGGAGGTTTTGAGGAGGAGTTACGGACCAGAGGTTGACATATGGAGCGCCGGAGTGATTCTTTATATATTGTTATGTGGGGTTCCTCCGTTCTGGGCAGAAAGTGAACAAGGCGTTGCTTTGGCGATCCTGAGGGGCGTAATTGACTTCAAGAGGGAACCTTGGCCTCAGATTTCGGATAGTGCTAAAAGCCTGGTACGACAGATGCTGGAACCAGATCCTAAAAAGCGCTTAACAGCTGAACAAGTGCTTGAACATCCCTGGCTACAAAATGCAAAGAAAGCTCCAAATGTTCCTCTCGGAGATATTGTGAGGGCTAGGCTTAAGCAGTTCTCTGTGATGAATAGATTCAAAAAGAGAGCCCTCAGGGTAATTGCTGAACATTTATCTGTTGAAGAGGTAGAAATAATGAAGGATATGTTCACATTGATGGATGTTGACAAAGATGGCAAAGTAACATATGAGGAACTCAAGGCCGGGTTGCAGAAGGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAACGGAGTACTAGACTATGGAGAGTTTGTAGCTGTGACAATTCACCTGCAGAAAATGGAGAATGATGAGCATATCCACAAAGCATTCATGTTCTTTGACAAAGATGGCAGTGGGTATATTGAGTTAGATGAGCTACGTGAAGCATTAACTGATGAGTCAGGTGAGACTGAAGCTGATGTATTGAAAGACATTATGCGCGAGGCTGACACAGACAAGGATGGCCGGATAAGTTATGAGGAGTTTATGGCCATGATGAAAACTGGAACTGACTGGAGAAAAGCATCAAGACAATATTCCAGGGAGAGATTCAAGAGTCTGAGCCTAAACTTGATGAAGGATGGTTCGCTTCAGCTTCATGATGGGATTAGTGGCGAATCCGTGGTGGTTTGA 1641 0.4698 MGNCCVKADVIEKSNHDSNQAAKKKNKEGRPNPFSEEPIHSTAPIRVLKDVIPLSHRTRISDKYVLGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPDHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAASVARTIAEVVKMCHANGVMHRDLKPENFLFANKKENSALKAIDFGLSIFFKPGEKFSEIVGSPYYMAPEVLRRSYGPEVDIWSAGVILYILLCGVPPFWAESEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAEQVLEHPWLQNAKKAPNVPLGDIVRARLKQFSVMNRFKKRALRVIAEHLSVEEVEIMKDMFTLMDVDKDGKVTYEELKAGLQKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHIHKAFMFFDKDGSGYIELDELREALTDESGETEADVLKDIMREADTDKDGRISYEEFMAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGISGESVVV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0682 546 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Acco13g0682 546 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Acco13g0682 546 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Acco13g0682 546 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Acco13g0682 546 CDD EFh 441 503 IPR002048 GO:0005509
Acco13g0682 546 FunFam Calcium-dependent protein kinase 7 331 506 - -
Acco13g0682 546 Gene3D Phosphorylase Kinase; domain 1 65 149 - -
Acco13g0682 546 SMART efh_1 477 505 IPR002048 GO:0005509
Acco13g0682 546 SMART efh_1 441 469 IPR002048 GO:0005509
Acco13g0682 546 SMART efh_1 405 433 IPR002048 GO:0005509
Acco13g0682 546 SMART efh_1 369 397 IPR002048 GO:0005509
Acco13g0682 546 MobiDBLite consensus disorder prediction 15 34 - -
Acco13g0682 546 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Acco13g0682 546 Pfam Protein kinase domain 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0682 546 SUPERFAMILY Protein kinase-like (PK-like) 45 349 IPR011009 -
Acco13g0682 546 SUPERFAMILY EF-hand 350 529 IPR011992 -
Acco13g0682 546 Gene3D - 331 506 - -
Acco13g0682 546 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Acco13g0682 546 CDD STKc_CAMK 63 321 - -
Acco13g0682 546 ProSiteProfiles Protein kinase domain profile. 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0682 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Acco13g0682 546 Gene3D Transferase(Phosphotransferase) domain 1 150 330 - -
Acco13g0682 546 Pfam EF-hand domain pair 440 503 IPR002048 GO:0005509
Acco13g0682 546 Pfam EF-hand domain pair 370 429 IPR002048 GO:0005509
Acco13g0682 546 SMART serkin_6 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0682 546 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Acco13g0682 546 MobiDBLite consensus disorder prediction 15 40 - -
Acco13g0682 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 498 - -
Acco13g0682 546 FunFam calcium-dependent protein kinase 13 150 330 - -
Acco13g0682 546 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Acco13g0682 546 FunFam Calcium-dependent protein kinase 1 66 149 - -
Acco13g0682 546 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0682 Acco-ChrAcco13 4984954 4988885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0682 1 546 EF-hand Containing Proteins AT1G18890 81.204 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco13g0682 Pkinase 2.5e-76 CL0016