Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0680 ATGACCCTTAAAGGTGGCACAAAGCAGGCCTGTGCAGCCTGCAAATTTCAGAGAAGGAAGTGTACCCCGGAATGTGTTCTCGCTCCTTACTTCCCTGCTGATCAACCCAAGGCGTTTCAGAATGTCCACAAGCTATTTGGAGTCAGCAACGTTGAGAAGATACTCAAGACCTTGGACCCTAGCCAGAAGAAATTAGCCATGGAATCCATCATTTTGCAAGCTAATTTCAGAGATAAATACCCTGTTCATGGCTGCTGTGAGGTGATTTGCAGGCTTAATTACCATATATGGTACGTTGAAGAAGAGCTTCGTGCTGTTTATCAGCAACTTGAGATTTGCAGACAACATTTTTTGCAGCAGCACCAAGGTTGTTCTTCATCTTTAATGCTTGATGATGTCACTTCACAGTTAGAGTTGGCGATGACGACGACGACACCTCGTAATAATTATGCACTACCACTCTTAAACCATAATCCTTTGATAATAAAACCAGAGACATATAATTCAGAGCTTGCTTTGCCTGCAGTTTACGACCAAGATTCTTACCGTAACAGCAATAGTTCTGTGGGATACAACTCCATCGATGTGGAATCTAAGGATCATGTTGTTACACCAAATATCTTGTGGGTCCACCAGAATCCCTGCCAAGATGATGATGGAGATTCCATGGCCATGGCCATGAGTTCCCAGTTACAGTTGGTTGCCTCGCCGCCACTGGATATGGAACAAAAGGTTGTCGGAGAATATTACGATGAAGTTACTCCACTTTTTTGA 774 0.4354 MTLKGGTKQACAACKFQRRKCTPECVLAPYFPADQPKAFQNVHKLFGVSNVEKILKTLDPSQKKLAMESIILQANFRDKYPVHGCCEVICRLNYHIWYVEEELRAVYQQLEICRQHFLQQHQGCSSSLMLDDVTSQLELAMTTTTPRNNYALPLLNHNPLIIKPETYNSELALPAVYDQDSYRNSNSSVGYNSIDVESKDHVVTPNILWVHQNPCQDDDGDSMAMAMSSQLQLVASPPLDMEQKVVGEYYDEVTPLF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0680 257 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
Acco13g0680 257 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Acco13g0680 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0680 Acco-ChrAcco13 4960126 4960899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0680 1 114 AS2 family AT3G47870 62.281 4.27e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco13g0680 LOB 2e-34 No_clan