Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0679 ATGCAATTTCGATCTGTTCAATGTGTGTTTATTGGCTATAGTTCTATACATAAAGGCTATAGGTGTTGGGATCCTTGTGGGCGTACTTATATTTCTCGTGATGTAATTTTCAATGAAAGTGGGTTTCCTTATAGTCGACTTGTTCACTGCTCAGCCTCTGTGTCCAGATCATCTGCTACTGTGTTACCTCCTGGCAATCCTCCTCACATTTCATCTGTTGATCAGTCAAATATTTCTGGTCAATGTGGTTCTGCTAGTTCTCTTTCTCCTGCTCAAAATAATGTTTCTGGACAAACTAGTGGTTCTCCTATTGCTGATCCTACATTGTCACCTGCTGCAACAACAGTCTCTCCTCCTGTCTCTGCTAACAACACAACTTACACTTCATCACTGCCCAGCTCTAGTTCTTCAGATGCAAGTTCTAGTACCTCTGTTCCAACTTCTGTACCTACCAGGATGGTTACCAGATCCATGAATGGTATATTTAAACCTAAAGCCTTAATTGTTGATACTTCTAATGATGAACTTACTTCTGTTTCTCAAGCACTCAACTGTCCAAAGTGGAAGGCTGCCATGGATGCTGAGTCTGCTGCCTTAATGTCTAACAATACTTGGCATCTTATTCCTCTTCCTCCAGACAGATCAACAATTGGATGCAAGTGGGTCTTTAAGAAAAAGACGTTTCCTGATGGTACTTGGAAAAACAAGGCCCGCTTAGTTGCCAAGGGATTTCACCAACAAGAGGGATTTGACTTTAAAGAAACTTTTAGCCCTGTTGTGAAACCTGTGACCATTCGTGTCATTCTTTCTCTTGCAGTAGCCCATCATTGGACCATTCGTCAAATTGATGTCAACAATGCCTTCCTTAACGGTTTTCTCAAGGAGGAGGTTTATATGGTTCAGCCTCCAAGTTTTGAATCTCCTGATAAGACCTTAGTTTGTAAGCTTGATAAAGCTTTGTATGGTCTCAAACAAGCTCCTCGTGCTTGGTTTGAGAGACTTGGTACTGCCTTGAACCAATTTGGTTTCTCCAACAGCAAGTGTGATCAAAGCCTCTTCATTAGAAAGTCTACTTCTGAAATTACTTATGTGTTAGCGTATGTGGATGATATTATTCTCACAGGAACTTCTGCTGATGCTATTTCTGTGCTAATTTCAGCTTTACATGATAAATTTGCTCTCAAGGATCTTGGGCCTTTACACTATTTTCTGGGTATTGAGGTCAAGAGACTTCATGATGGTTCTCTTTTCCTATCTCAGGCAAAGTACATTCATGGTCTGTTAGCCAAAGCTGGCTTCACTAAGGCTCGGCCAGATCCTACTCCCATGTCCTCTGGCACTGTTTTGGTCAAGGCTGGTTCTCAACCAATGGTTGATGTCTCTCTCTATCGGACTATTGTTGGGTCACTTCAATATGCTACTATTACACACCCTGAGATTTCTTTTGCTGTTGGAAAAGTCTGTCAGTTTATGCAGGAACCTTTTTTGGAGCATTGGAAGGCAGTCAAACGGATTCTTCGGCGTAGCATCTCTGGATTTTGTGTCTTCTTTGGACCCAATCTTGTCTCTTGGTCCTCTAAAAAGCAACTCACTGTCTCCCTTTCCAGCACTGAAGCCGAATATCGTAGCATGGCTTCTACAGTGAGTGAAATCTTATGGCTTCGGTCCTTATTCCGTGATTTAGCTGTTCGTCTTGTTTGTACTCCTCGTGTCTTCTGTGATAACCAGAGTGCTGTTCTAATGACTGCCAATCCCATACTCCATGCTAGAACCAAGCATCTTGAATTAGACTTGCATTTTGTTCGTGAACATGCCATTCAAAGGGATATTCGTGTCTGTCATATTCCTTCCTCTCGTCAAATTGCTGATGGCTTCACTAAACCAATCACTCGTCGCAGCTTCGCCATGTTTAAGAAACACTTAGGTGTTGTAGATATTATCTTCCCTGCATTGGATGTACATGTAAAAAATGTAATTTGTACTTATTCCCTTGAACATGATGGCGTCGATGACGCCTTCAACTCAATCTTTCAATATTTAGATGAGTTGATGGATCCAAATGAGGATATTTCCAAACTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTCCAGCATATGCAGAAGGAAGAAGAGCAGGTTTTTCCTCTCTTGTTGCAGAAAGTTTCTATCGAGGAACAGGCTTCGCTGGTCTGGCAATTCATATGCAGTGTTCCCATAATGTTGCTGCAGGAAATTTTGCCATGGATGGTATCATTTCTTTCTGCAGACAAACAAGAAGAAGTTCAGAAGTTCTTAAATGAAATTACACCAATGGAGAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTAGTAGCAACAGCCAAATATTCACTGAGGACCGTTCACTGAATGAAGTTGTTCAATGTGTTGATGGATTCCTGCATAAGAAAAGACCACGCGGGTTGAGTTATTGCAATAAGAATTTTAAAGCCATTTCAATTAAGATGAAAGAAAATTGCTCAGACGTAGAAGATACCAATCAAGTTAATGTTCTTTATCTTTGGCATAATGCCATCAAGAAAGATATGAAAGAGATGCTAGAAGAACTTCATCGAATCAGAAACAACACTTGTTTTCATAATTTGGATTCGCTACTCATCCAACTAAAATTCTTCGCTGATGTTCTCATCTTCTACAGCATTGCTCAGAAGAAATTCTTTTACCCAGTTTTGAGTGAACTTGCTAATGGCTGGTTGACCAAGTCAAGTGAACAATTTCTCAGAGACAGTCATATTGAAGATTTACAGCAGTTGCTTTTGTATAATCCTGAAAGCGGTTTTTTGTCAGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGAACTATTTATGACAAGAATGAACAAACAATTTGCTTTTCAAGAAACTGAGGTATTTCCTGTCATTCGCTTGAATCGCGACAATGGAATGCTAGAGGAACTCATCAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGTGATAACTTGGTTCTCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAGTGCCATAAAACAAGGAAATCTTTTTGTCCATGAAGCTTTTGCATCACTTGTACATGAGTGGTTCCGTGTTGGTTATTCAGGTAAAGCTTCCGTTGAAAAATTCCAACAAGACTTGCGACATATTTTTAAAAGCAAAAACTCTTTGTTAACTGAACAAGTCAAAGAAGCTCCCAGGTTTTCTTTGTTAAATGATGACAAACCTCATAAAGGATCTATCCTCAGTAATGATTTGTCTTATTCATCATCTTCTGGATTCAACAATGTGACAAAGTATGAGACACCATACTCTATGGGCATTAATATGCAAATATTTTTCCCCGCCACAGCTATGAAGTTAAACCGCCATCCTAGATTTCAGGCAGCTGATAGTTCTTCTGCTCCCTTTCTTGATGATTCAAAGCCTATTGACCTTATATTCTTCTTTCACAAAGCTATCAGGAATGATTTGGATTACCTTGTTCTTGGATCAGCACAGATAGAAAAAAATGTTCAGATGCTTGTGGATTTCAGCAGAAGATTTCATCTAATATGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCCTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTCTCTTATAAGATTGATCACAAATTCGAAGTTGAACACATCAAAAAAATATCCTGTATCCTTGAAAAGATGTTCAATCTACATTTTTCAGTTTCTAGCTTTGAAACAGATACATGGGAGCAGAGAATGCTAACTCATCTTCAACTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAAATTCTTTCCGACCACATGAATCGTGAAGAAATTGAAATTTGGCATTTAATTAGAGAATTCTTCTCCAATAAGGAGCAAATGAAAATCGTAGGGTGCATGCTTGGAAGAATCAGGGCAGAAATATTACAAGATATGATACCCTGGTTAATGACATCTTTAACCCCCGAGGAACAACATGTTTTAATGTTCTTATGGTCCATGGTTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAGTGGTGGGATGGGTACAGGATAGAAAAGGAGGTAGAAAGTTCAAATGATCCTCCAATTCAGACTGTTGATCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTTGATGAACTCCAAGAAGAATCCACTTCCAACAAAAACGAATTTTCTTCAAAGAGGGATCATATTGGTGATAATAATAAGCAGTCTCACATTTGCAATCTTCAGGGCAAATCCCGAGTTCGTAAAGCAGATAAGATTAGTAGTGAATGTTCAGAATGCAGAAATCAATTGAGTGATAATGACAAACAAACATTCACTAATCTTTCAGATGTCACAAGTTCGATCAATGATAAGGGTCAGTCTTTTCAATTCAGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAGTCCAGATGATCTGGAGATGGCTATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATATATAATTCAGAATCTACTTGTGAGCCGTTGGATTGTTAAACAGCATATCTCTTGTTCAGAAGGCACTGGGACAAACAATGGGCAGGATTTTCCTGGGCAGCATCCGTCTTACAGGGACTCTCTCAAATTAATCTATGGCTGCAAACACTACAGGAGAAGCTGTAAACTTTTAGCTTCCTGCTGCAACCAACTTTTTACATGCATACATTGCCATAATGATGCAACAGATCATTCAATTGACAGGAAATATATAACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAGCCAATCAGTGCCACATGTTCAACTGCATCTTGCGGTAACTCACCCATGGCAAAATACTACTGCAGGATCTGTAGATTGTTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTGGGAAAAGGCTTGGGCTTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGTCTCGTTCGCTCACAGTACATATATGCAGAGAGAAATCTTTAGAGGATAACTGCCCAATCTGTCATGAATACATCTTCACGTCCTGCTCTCCAGTAAAGGCCCTCTCTTGTGGTCATGTCATGCATTCAACATGTTTTCAGGAGTATACTTACTTCAATTATACCTGCCCAGTATGTTGCAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGATGCGTTATTGGCTGAAGAGAAAATCCCGGACGAGCATTTGGGTCAAACTCAGATGATACTATGCAATGACTGTGAAAAGAAAGGAACTGCTCCCTTCCACTGGCTTTACCACAAATGCTCTTCTTGCGGGTCCTACAATACAAGAGTTATATGA 5442 0.3971 MQFRSVQCVFIGYSSIHKGYRCWDPCGRTYISRDVIFNESGFPYSRLVHCSASVSRSSATVLPPGNPPHISSVDQSNISGQCGSASSLSPAQNNVSGQTSGSPIADPTLSPAATTVSPPVSANNTTYTSSLPSSSSSDASSSTSVPTSVPTRMVTRSMNGIFKPKALIVDTSNDELTSVSQALNCPKWKAAMDAESAALMSNNTWHLIPLPPDRSTIGCKWVFKKKTFPDGTWKNKARLVAKGFHQQEGFDFKETFSPVVKPVTIRVILSLAVAHHWTIRQIDVNNAFLNGFLKEEVYMVQPPSFESPDKTLVCKLDKALYGLKQAPRAWFERLGTALNQFGFSNSKCDQSLFIRKSTSEITYVLAYVDDIILTGTSADAISVLISALHDKFALKDLGPLHYFLGIEVKRLHDGSLFLSQAKYIHGLLAKAGFTKARPDPTPMSSGTVLVKAGSQPMVDVSLYRTIVGSLQYATITHPEISFAVGKVCQFMQEPFLEHWKAVKRILRRSISGFCVFFGPNLVSWSSKKQLTVSLSSTEAEYRSMASTVSEILWLRSLFRDLAVRLVCTPRVFCDNQSAVLMTANPILHARTKHLELDLHFVREHAIQRDIRVCHIPSSRQIADGFTKPITRRSFAMFKKHLGVVDIIFPALDVHVKNVICTYSLEHDGVDDAFNSIFQYLDELMDPNEDISKLFQELICCIGILQATTFQHMQKEEEQVFPLLLQKVSIEEQASLVWQFICSVPIMLLQEILPWMVSFLSADKQEEVQKFLNEITPMEKELQEVLIAWLSSNSQIFTEDRSLNEVVQCVDGFLHKKRPRGLSYCNKNFKAISIKMKENCSDVEDTNQVNVLYLWHNAIKKDMKEMLEELHRIRNNTCFHNLDSLLIQLKFFADVLIFYSIAQKKFFYPVLSELANGWLTKSSEQFLRDSHIEDLQQLLLYNPESGFLSEFVEKLCRELELFMTRMNKQFAFQETEVFPVIRLNRDNGMLEELISLSLHMMPLGLLKCVITWFSGHLSENESRSILSAIKQGNLFVHEAFASLVHEWFRVGYSGKASVEKFQQDLRHIFKSKNSLLTEQVKEAPRFSLLNDDKPHKGSILSNDLSYSSSSGFNNVTKYETPYSMGINMQIFFPATAMKLNRHPRFQAADSSSAPFLDDSKPIDLIFFFHKAIRNDLDYLVLGSAQIEKNVQMLVDFSRRFHLICFLHRIHSETEDEIAFPALEAMSKVKNISLSYKIDHKFEVEHIKKISCILEKMFNLHFSVSSFETDTWEQRMLTHLQLCRKLQEMCKSMHKILSDHMNREEIEIWHLIREFFSNKEQMKIVGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMVAKNTMFDEWLAEWWDGYRIEKEVESSNDPPIQTVDPLEIISKYLSKEVLDELQEESTSNKNEFSSKRDHIGDNNKQSHICNLQGKSRVRKADKISSECSECRNQLSDNDKQTFTNLSDVTSSINDKGQSFQFSENSGHYDHLMKISPDDLEMAIRRVSRDSSLDLQKKSYIIQNLLVSRWIVKQHISCSEGTGTNNGQDFPGQHPSYRDSLKLIYGCKHYRRSCKLLASCCNQLFTCIHCHNDATDHSIDRKYITKMMCMKCLKIQPISATCSTASCGNSPMAKYYCRICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMSRSLTVHICREKSLEDNCPICHEYIFTSCSPVKALSCGHVMHSTCFQEYTYFNYTCPVCCKSLGDMQVYFRMLDALLAEEKIPDEHLGQTQMILCNDCEKKGTAPFHWLYHKCSSCGSYNTRVI 1813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0679 1813 ProSiteProfiles Zinc finger CTCHY-type profile. 1643 1706 IPR017921 -
Acco13g0679 1813 CDD RING-H2_Pirh2-like 1706 1748 - -
Acco13g0679 1813 SMART ring_2 1707 1748 IPR001841 -
Acco13g0679 1813 SUPERFAMILY Zinc hairpin stack 1644 1698 IPR037275 -
Acco13g0679 1813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1700 1750 IPR013083 -
Acco13g0679 1813 Pfam Zinc-ribbon 1754 1811 IPR039512 -
Acco13g0679 1813 MobiDBLite consensus disorder prediction 1416 1439 - -
Acco13g0679 1813 Gene3D nmb1532 protein domain like 617 741 - -
Acco13g0679 1813 Gene3D nmb1532 protein domain like 1158 1328 - -
Acco13g0679 1813 CDD RNase_HI_RT_Ty1 507 631 - -
Acco13g0679 1813 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 202 443 IPR013103 -
Acco13g0679 1813 SUPERFAMILY DNA/RNA polymerases 202 600 IPR043502 -
Acco13g0679 1813 Gene3D - 1778 1813 - -
Acco13g0679 1813 MobiDBLite consensus disorder prediction 81 151 - -
Acco13g0679 1813 ProSiteProfiles Zinc finger RING-type profile. 1707 1748 IPR001841 -
Acco13g0679 1813 Coils Coil 855 875 - -
Acco13g0679 1813 ProSiteProfiles Zinc finger CHY-type profile. 1571 1640 IPR008913 GO:0008270
Acco13g0679 1813 SUPERFAMILY RING/U-box 1694 1753 - -
Acco13g0679 1813 CDD Hr-like 1162 1307 - -
Acco13g0679 1813 PANTHER GAG-POL-RELATED RETROTRANSPOSON 117 646 - -
Acco13g0679 1813 MobiDBLite consensus disorder prediction 1416 1435 - -
Acco13g0679 1813 Pfam CHY zinc finger 1578 1653 IPR008913 GO:0008270
Acco13g0679 1813 FunFam Zinc finger protein-related isoform 1 1702 1751 - -
Acco13g0679 1813 CDD Hr-like 599 721 - -
Acco13g0679 1813 SUPERFAMILY CHY zinc finger-like 1570 1634 IPR037274 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0679 Acco-ChrAcco13 4949700 4959155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0679 605 775 C2H2 Transcription Factor Family AT3G18290 26.570 9.44e-09 58.9