Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0675 ATGTCCGAAGGATCCCTCTGTCCTTCTCCGATTTCCGGCGAACCTGGTAACCGATCCTCGCCGGAACTAAATTCCGAAAACCACCTCCCTGATTCTCAAAACGGGGTTGCCACTTCTAAGGAAGAAACGCCAGCCGCTCCTACGACTACGAGGAGCAACCGGCCGTCGCGCGCGTGCACCATTCGCGCTGCGACTCGTCTCTATTCATCGGTGCAGCCGGCGATCCAACGGAAGTCCAAAGAGGTGAAGAAGGAGGAGAAGCTGGAAGACTCGCAGCAGCAGCAATGCAGCAAGATCGTGACGCCATTAGTAGAACCGCCTCCACCTTCGCAGTTGCCTCGGTGGAACCTGCGGTCCATGTGGGAATTAGCTTCTGTACTAAATTTCTTGCATGTATTTAGGCCTCTCTTAAACATCTCAGTGGAATTTTCGGCTGAAGAATTCGAGACAGCTCTCCTTATGCCCAACGATACGTTGAGTGATATACATATGCCGCTGTTAAAGGCAATCCCTCCCATCACAAGAATGGCACTCACACGTGATACTTGGATAACTGTGTTATGCAGAAAATTGAGAGATTGGTGGTTTTGGGTTGCTGATGGCGATGTTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGCATATAAATCACTTGATCCTGGGGTCCGTGTTGTCATCTTAAAAGCTTTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTTAGACATGGCGTTCAACTATCAACATTTCGAAAAGAGCGTATTGGGGGTGATTCTCATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTATATCGTGAAACAAGGAAAACTGAAGTATTTCAACTGAAGAAGGGGAAGGCAAAAGGTTCAAAGGTTCTTTCTAATACATCATATCAGTGGGAAGCTGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTGCTCAAGTAAAAATAGAACTGAGGTTTCTCTAGGGAAAAAGCTGAAGATAGACATGCTTCCTGAGATTGAGAAAGTTCACAAGCGGAAGGAGAGGTTGCTGAAAAAGCAACACAGACAGGCTCTTCTTCTTGATAATTTCTTAGGGGTGGATGGCCTTGCTACCGGGCGTTCACTTCGTGATAGGAAGCCTGTTACTTACACATTTGATGATTATGATCGATCCATCAATGAGGCCATTAAAGTAACCAAACAAAAACAGCCATCTCCAGAACCTGCGTCTAGGAGAGAAATGGTAGGGAAGCATGAAACCTTGAGTAATGGTAGCCGGAGTGGTCCTTCACATACCTCAGAACATCTGAATTTTAGTATGCCATCTCCGAAGTCACCTGACTTTGATGATGAGGAGGAAGAGCACAAAGCTGAATTATTGGACCGAAGCAATCGACGAAGACAGAGGCCTTTGCGGTACTCAGAGAAAGAATTTGTTGAGGCATTATCTGATAACGATGCTGACTATGACAGCGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAGTATCTCAGGAAACGTAAGCAGAGAAGGAACCATTCTAGTAGCTCTGAGGGAGATGATGAATATCAGTGGGATGAAGACAATGTTGAAGAAGAAGAGGATGATGAAGATTCTTTGAGCATCAGTGAAGACAGTGATAAGCTTCAGAAATCCAGGCAATTGCCAGGTCGTACTAGGAGAGAAACTAAACTCAGGTCTGTGGATGAGATTAACATTGGTTTACGACGCAGTAAGAGGGCCACCAGAAACCGTATCAACTATCGTCAATATGATATGTCAGAATCAGAGCCAGAGTGTACGAAACCTGAGAAGTCTAATGCTTCAGACAATCACTCAGGTCCCAGCGAAAATGGCGATTATATGATGGAAGATGAAGATTCAGATGACAATGATGGCGAAGATCAGGAAACAAAAGAAGAGAATGAGCCCCATGCTAGTGTTGCAGAGGAAGAGAAAGGACAACAAAAGCAACCTCCTGAAAAGTCAGATAGTCCTAATCAGGAGGAAGGCGAGTGCACAAAAAAAAGACGCTTCCTCGATTTGAATGAGCTTGCCCCTACATCTGGTTTTGATGATGGTCTAAACACGATGATGAAAGATGAGGAAAATGGTGTTAAAGCTTCCCCCCCTTCATGA 2190 0.4466 MSEGSLCPSPISGEPGNRSSPELNSENHLPDSQNGVATSKEETPAAPTTTRSNRPSRACTIRAATRLYSSVQPAIQRKSKEVKKEEKLEDSQQQQCSKIVTPLVEPPPPSQLPRWNLRSMWELASVLNFLHVFRPLLNISVEFSAEEFETALLMPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWFWVADGDVPIVASHGAEVEAYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLRHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYRETRKTEVFQLKKGKAKGSKVLSNTSYQWEAVATNFDEFQDVSEKLCSSKNRTEVSLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLATGRSLRDRKPVTYTFDDYDRSINEAIKVTKQKQPSPEPASRREMVGKHETLSNGSRSGPSHTSEHLNFSMPSPKSPDFDDEEEEHKAELLDRSNRRRQRPLRYSEKEFVEALSDNDADYDSDDDIVGEAVYDEEYLRKRKQRRNHSSSSEGDDEYQWDEDNVEEEEDDEDSLSISEDSDKLQKSRQLPGRTRRETKLRSVDEINIGLRRSKRATRNRINYRQYDMSESEPECTKPEKSNASDNHSGPSENGDYMMEDEDSDDNDGEDQETKEENEPHASVAEEEKGQQKQPPEKSDSPNQEEGECTKKRRFLDLNELAPTSGFDDGLNTMMKDEENGVKASPPS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0675 729 Pfam DDT domain 125 170 IPR018501 -
Acco13g0675 729 MobiDBLite consensus disorder prediction 637 654 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 607 623 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 1 76 - -
Acco13g0675 729 PANTHER REMODELING AND SPACING FACTOR 1 50 719 IPR028938 GO:0006355|GO:0031213
Acco13g0675 729 MobiDBLite consensus disorder prediction 1 105 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 560 594 - -
Acco13g0675 729 Coils Coil 75 95 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 518 537 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 518 729 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 77 92 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 460 478 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 655 699 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 538 559 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 435 455 - -
Acco13g0675 729 MobiDBLite consensus disorder prediction 411 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0675 Acco-ChrAcco13 4910579 4918029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Acco13g0675 DDT 1.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2663 04 43444169 43451284 Acco13g0675 13 4910579 4918029 CCT