Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0669 ATGGATCCTCCTCTCATCAACGAGTCTACATTCTCCCACGCTAATCCTTCTTCCTATAGTCTTGCCGAGATTTGGCCTTTGCCTGGGGACCACCCTGCCGGACCTGGATTGGGCCTCCGAATGCCTCATTTAGGTCACAATTTGGGCCCCTTCCCCGATAATTCCCTCCGTCGAGATGGCTCTGCCGAGGAGTCCACCGTCACGGAGCAGAGCGTCGGCGGACAAAATCACAGGAAGAGGAAAGATGCCACCTCTGAGGACGAGTCCTCAAAGATGGCTTCCATGATTACTGCCAATGATTTGAATGATTCTGGCAATAAACGGATGAAATTAGTAGTATCCAAGGATGAAAACGGTGGTCCGAAGGCTGAAGCAGAAGCAAGTTCAGTAGCTGGTAGCAAGTCAGCTGAACAAAGTACTAAACCTCCCGAGCCTCCTAAGCCAGATTATATACACGTGAGAGCAAGAAGAGGCCAAGCTACTGATAGCCACAGTCTTGCAGAAAGAGCAAGAAGGGAGAAGATCAGCGAGAGGATGAAAATTCTACAAGATTTGGTCCCTGGATGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGAGATAATCAATTATATCCAATCACTACAGCGGCAGGTTGAGTTCCTTTCAATGAAGCTCGAGGCAGTTAATTCAAGAATGAACGTGAACCCGACTATTGAAGGGTTCCCTTCAAAAGATCTTGGTGCTCAGACATTTGACGTTGCTGGAATGGTATTTGGATCACAAGCAGGCAGGACGTTTGCCGAGGGAACACAACTCGGATGGCTGCAGATGCAGATAGGTGGTGGTTTCGAGAGAGCAACATAG 849 0.4841 MDPPLINESTFSHANPSSYSLAEIWPLPGDHPAGPGLGLRMPHLGHNLGPFPDNSLRRDGSAEESTVTEQSVGGQNHRKRKDATSEDESSKMASMITANDLNDSGNKRMKLVVSKDENGGPKAEAEASSVAGSKSAEQSTKPPEPPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNVNPTIEGFPSKDLGAQTFDVAGMVFGSQAGRTFAEGTQLGWLQMQIGGGFERAT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0669 282 SMART finulus 165 215 IPR011598 GO:0046983
Acco13g0669 282 MobiDBLite consensus disorder prediction 36 150 - -
Acco13g0669 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 228 IPR036638 GO:0046983
Acco13g0669 282 MobiDBLite consensus disorder prediction 89 104 - -
Acco13g0669 282 FunFam Basic helix-loop-helix transcription factor 156 228 - -
Acco13g0669 282 Coils Coil 206 226 - -
Acco13g0669 282 Gene3D - 156 232 IPR036638 GO:0046983
Acco13g0669 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
Acco13g0669 282 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 65 252 IPR024097 GO:0006355
Acco13g0669 282 CDD bHLH_AtBPE_like 149 232 - -
Acco13g0669 282 Pfam Helix-loop-helix DNA-binding domain 163 210 IPR011598 GO:0046983
Acco13g0669 282 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0669 Acco-ChrAcco13 4870824 4873578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0669 1 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 54.386 1.75e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco13g0669 HLH 2.3e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0669 13 4870824 4873578 Acco13g0669 13 4870824 4873578 ECH