Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0666 ATGGTGTCCACGTCTCAGAAGAAAAACCTTCACTCACTCCTTGCTGCAAACCTTGGCAAGCTCACTATACCTTCTTCTTCTTCTTCTTCTTCATCCACCGGTCACCATGATTTCGACTTTCCACCTTTCTCTTCTCACGATCCCAATCCATCTCCATCTACTTCTGCCATTCCTGGTAGCCCACAGGTTATACAGAGTAGGTCCCACTCCTTTGTGGGACCCTCCCCACGATTCGCCCAATCCTCTAATTCCCTGGCGTTTGTTGATGAACTCGATTCCCAGAGCGACGACGAGGCTGAAATTGATGTCGGAGGTGGATTAGGAACTGATTGTGCAGTTGATGAAAAGCAAGTGGGTGAGAGTGATTCTGGAGAGAAATTGGTGGTCAAAATTGGACCTGGGGATTTTCAAATCTTGAGACTTGTAGGGCAAGGAGCGTTCGGGAAGGTTTTTCTGGTAAGGAAAAGGAGTGGCCATTTGGACGGAGACGGTGGTGGTGGTGATGGCATTTTTGCTATGAAGGTGATGCGAAAGGAGACGATCATAAAGAAGAATCATGTGGATTATATGAAAGCTGAGAGGGATATTCTCACTAAAGTAGTTCATCCTTTTATTGTTCAGCTCCGGTACTCTTTTCAGACTAAATCTAAATTATATTTGATCTTGGACTTTATAAATGGAGGACATCTCTTCTTTCATCTGTATCGGCAGGGTATCTTCAGTGAGGATCAGGCGAGGCTTTACACTGCTGAGATAGTTTCTGCTGTTTCCTATCTTCACAAGTGTGGAATCGTGCACCGGGATCTTAAACCTGAAAATATACTCATGGATGCTGATGGGCATGTAATGTTAACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGCAGGTCTAACTCTTTATGTGGGACCATGGAATATATGTCTCCAGAAATCTTACTAGCTAAAGGCCACAACAAGGAAGCAGATTGGTGGAGCATCGGTATACTGTTGTATGAAATGCTAACTGGGAAGGCCCCATTTACACACGCCAATAGAAAGAAACTTCAAGAGAAAATTATTAAAGAGAAGGTGAAACTTCCACCGATGCTAACCGGCGAAGCTCACTCTTTGCTTAAAGGATTGCTGCAAAAGGATCCATCAAAAAGGCTGGGCAATGGACCAAATGGAGACAACCAAATTAAAAGTCACAAGTGGTTTCACTCGATCAATTGGAAGAAACTGGAGGCAAGAGAATTGCAGCCAAAATTCAAACCAGATGTGAGTGGCTTAGACTGTACAGCCAATTTTGATAAATGCTGGACCTCAATGTCTCCGGTTGATTCACCGGCATCCACACCTACAGCTTCTGATCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCAACTAAGCTAGACTGA 1416 0.4407 MVSTSQKKNLHSLLAANLGKLTIPSSSSSSSSTGHHDFDFPPFSSHDPNPSPSTSAIPGSPQVIQSRSHSFVGPSPRFAQSSNSLAFVDELDSQSDDEAEIDVGGGLGTDCAVDEKQVGESDSGEKLVVKIGPGDFQILRLVGQGAFGKVFLVRKRSGHLDGDGGGGDGIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSYLHKCGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESGRSNSLCGTMEYMSPEILLAKGHNKEADWWSIGILLYEMLTGKAPFTHANRKKLQEKIIKEKVKLPPMLTGEAHSLLKGLLQKDPSKRLGNGPNGDNQIKSHKWFHSINWKKLEARELQPKFKPDVSGLDCTANFDKCWTSMSPVDSPASTPTASDHFQGYTYVAPNPWLSTKLD 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0666 471 MobiDBLite consensus disorder prediction 23 75 - -
Acco13g0666 471 Gene3D Phosphorylase Kinase; domain 1 135 447 - -
Acco13g0666 471 PANTHER RIBOSOMAL PROTEIN S6 KINASE 80 463 - -
Acco13g0666 471 FunFam Non-specific serine/threonine protein kinase 134 247 - -
Acco13g0666 471 MobiDBLite consensus disorder prediction 23 38 - -
Acco13g0666 471 Pfam Protein kinase domain 136 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0666 471 SMART serkin_6 136 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0666 471 SUPERFAMILY Protein kinase-like (PK-like) 134 463 IPR011009 -
Acco13g0666 471 Gene3D Transferase(Phosphotransferase) domain 1 225 420 - -
Acco13g0666 471 Pfam Protein kinase C terminal domain 422 459 IPR017892 GO:0004674|GO:0005524|GO:0006468
Acco13g0666 471 ProSiteProfiles Protein kinase domain profile. 136 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0666 471 ProSiteProfiles AGC-kinase C-terminal domain profile. 402 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco13g0666 471 MobiDBLite consensus disorder prediction 49 75 - -
Acco13g0666 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Acco13g0666 471 ProSitePatterns Protein kinases ATP-binding region signature. 142 174 IPR017441 GO:0005524
Acco13g0666 471 SMART pkinase_C_6 402 461 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco13g0666 471 FunFam Non-specific serine/threonine protein kinase 225 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0666 Acco-ChrAcco13 4863695 4866861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0666 61 462 AGC Kinase Gene Family AT3G08720 60.539 2.64e-174 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Acco13g0666 Pkinase 6.3e-71 CL0016