Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0655 ATGGGTAGTGATGCTCTCCGGCTACAGGACCCGCCTTACTGCTCCGGCGAGCTGCATGTTCTTGCCGTCGATGACAGTTATGTCGATCGTAAGGTCATTGAGCGATTGCTGAAAATTTCTTCTTTTAAAGTGACGGTTGTAGAAAGTGGAACTAGAGCTCTTGAGTATCTGGGATTGGATGGACAGAAGAAGAGCTCCATTGGATTTGAGAGTGTTAAGGTTAATCTGATAATGACGGACTATTCAATGCCGGGGATGACAGGATATGAGCTGCTTAAGAAGATCAAGGAATCATCTATTTTTAGAGAGATTCCAGTTGTGATCATGTCATCTGAGAATATCCTGACTCGAATTGATAGATGCTTAGAAGAAGGAGCAGAGGAGTTTCTGCTGAAACCGGTGAAGTTGGCAGATGTGAAACGATTGAAAGAATTCATAGTGAAGGGTGAAGGTAAGGAAAGTGGAGGAGAGAGAGAATCTCACATAAAAAGAAAAAGATCAGAAGATTGCAGTGAACTTCCACCAACACCATTATCATCAGTGTCTTGTCCTTGTGATCCATCATCTTCTTCACCATCTGCATTGTCCTCAAAGAAGTATAGATTACTAGCAGGGGTTGAATAA 624 0.4247 MGSDALRLQDPPYCSGELHVLAVDDSYVDRKVIERLLKISSFKVTVVESGTRALEYLGLDGQKKSSIGFESVKVNLIMTDYSMPGMTGYELLKKIKESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEFIVKGEGKESGGERESHIKRKRSEDCSELPPTPLSSVSCPCDPSSSSPSALSSKKYRLLAGVE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0655 207 Pfam Response regulator receiver domain 20 139 IPR001789 GO:0000160
Acco13g0655 207 CDD REC_typeA_ARR 20 142 - -
Acco13g0655 207 MobiDBLite consensus disorder prediction 150 207 - -
Acco13g0655 207 SUPERFAMILY CheY-like 17 142 IPR011006 -
Acco13g0655 207 Gene3D - 18 175 - -
Acco13g0655 207 MobiDBLite consensus disorder prediction 173 197 - -
Acco13g0655 207 ProSiteProfiles Response regulatory domain profile. 19 147 IPR001789 GO:0000160
Acco13g0655 207 MobiDBLite consensus disorder prediction 150 171 - -
Acco13g0655 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 201 IPR045279 GO:0009736
Acco13g0655 207 SMART REC_2 18 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0655 Acco-ChrAcco13 4786948 4788571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0655 18 152 Response Regulator Gene Family AT3G48100 80.741 1.06e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco13g0655 Response_reg 5.4e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0742 12 6982469 6983501 Acco13g0655 13 4786948 4788571 ECH
Acco13g0655 13 4786948 4788571 Acco13g0655 13 4786948 4788571 ECH