Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0652 ATGGCGATCCCAGTTCCCAGCAGACTGTTGTTTATTGATGGCGAGTGGAAAGAGCCAGTTCTCAAGAAACGAATTCCCATCATCAACCCCTCCACTGAAGAAAATATTGGGGATATTCCGGCGGCCACTTCCGAAGATGTAGAGCTTGCAGTGGCTGCTGCTAGAAGAGCCCTCATCCGGAACAAGGGCTCGGATTGGTCAACGGCTTCCGGGTCGGTTCGGGCTCGCTATCTGCGAGCTATTGCTGACAAGATTAAAGTTAGAAAGCCTGAACTAGCAAAACTCGAAGCAATAGACTGTGGAAAACCACTAGAAGAAGCACAGTGGGACATTGATGATGTTGCTGGTTGCTTTGAGTACTATGCTGACCTTGCTGAAGGTCTGGATGCAAAGCAAAAGGCTCCTGTATCTCTTCCCATGGACACCTTCAAGAGTTATGTTCTACAGGAGCCCATCGGGGTTGTAGGATTAATTACTCCCTGGAATTATCCTATGTTAATGGCTACATGGAAAGTTGCTCCAGCTCTGGCTGCTGGTTGTACTGCAATATTAAAGCCTTCCGAATTGGCATCTGTAACCTGTTTGGAGCTGGGTGATATCTGTAGAGAAGTGGGCCTTCCTCCAGGTGTCTTAAATATTCTCACTGGATTAGGCCCTGAAGCTGGTGCTCCTTTGGCATCCCATCCTCATGTCGACAAGATTGCCTTTACTGGAAGCTCTGCAACCGGTAGCAAGATTATGACAGCTGCAGCTCAACTGCTGAAGCCTGTTTCACTAGAGCTTGGTGGAAAAAGCCCGATCATTGTTTTTGAGGATGTTGACCTAGATAAGGCTGCTGAATGGACCATCTTTGGGTGCTTCTGGACTAATGGTCAGATATGCAGTGCAACATCCCGTCTTATTGTACATGAAAGCATAGCAACAGAATTTCTAAACAGAATGGTGAAGTGGATCGAAAATATCAAAATTTCAGACCCCTTGGAAGAAGGTTGCAGGCTAGGCCCTGTTGTCAGTGAGGGACAGTATGAAAAGATAATGAAGTTCATTGAAACTGCTAAAAAAGAAGGTGCAACAATTCTGACTGGTGGGTCCCGCCCTGAGCATTTAAAGAAGGGATTTTTCGTTAAACCAACTGTTATAAGTGACGTGACCACCTCCATGCAAATATGGAGAGAGGAAGTTTTTGGACCTGTTATCGCTGTAAAAACGTTTAGTAATGAGGAAGAAGCTATTGAGTTAGCAAACGACACCCATTATGGATTGGGTGCAGCTGTAATATCTAATGATCTAGAAAGATGTGAGCGTGTAACCAAGGCTTTCCAGGCTGGGATTGTCTGGATCAATTGTTCTCAGCCATGCTTCACTCAAGCCCCATGGGGAGGCAAAAAACGTAGTGGCTTTGGTCGTGAATTAGGAGAATGGGGACTTAACAACTACTTGAACGTGAAGCAAGTCACTCAGTACATATCTGATGAACCTTGGGGCTGGTACCAGAAACCTTCGAGGCTGTGA 1512 0.4597 MAIPVPSRLLFIDGEWKEPVLKKRIPIINPSTEENIGDIPAATSEDVELAVAAARRALIRNKGSDWSTASGSVRARYLRAIADKIKVRKPELAKLEAIDCGKPLEEAQWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPMDTFKSYVLQEPIGVVGLITPWNYPMLMATWKVAPALAAGCTAILKPSELASVTCLELGDICREVGLPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSSATGSKIMTAAAQLLKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIATEFLNRMVKWIENIKISDPLEEGCRLGPVVSEGQYEKIMKFIETAKKEGATILTGGSRPEHLKKGFFVKPTVISDVTTSMQIWREEVFGPVIAVKTFSNEEEAIELANDTHYGLGAAVISNDLERCERVTKAFQAGIVWINCSQPCFTQAPWGGKKRSGFGRELGEWGLNNYLNVKQVTQYISDEPWGWYQKPSRL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0652 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 277 - -
Acco13g0652 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Acco13g0652 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Acco13g0652 503 SUPERFAMILY ALDH-like 9 489 IPR016161 GO:0016491
Acco13g0652 503 CDD ALDH_F10_BADH 27 487 - -
Acco13g0652 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Acco13g0652 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Acco13g0652 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Acco13g0652 503 Pfam Aldehyde dehydrogenase family 21 485 IPR015590 GO:0016491
Acco13g0652 503 PANTHER ALDEHYDE DEHYDROGENASE 5 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0652 Acco-ChrAcco13 4770072 4774011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0652 1 501 Aldehyde Dehydrogenase Gene Family AT1G74920 80.639 0.0 864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2638 04 43244019 43248769 Acco13g0652 13 4770072 4774011 CCT
Acco13g0652 13 4770072 4774011 Acco13g0652 13 4770072 4774011 ECH