Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0636 ATGGTGCTCGGACCTTACTTTAATCTGTTCGATGCCATTAGAGGAGTCAATTCAAGTTCTCCTCAATCTTCTAGAGCTCTACCAAGGGTTATGAATGATCCTAGAATTATGTCTAATGATGATGGTGATCCATATGATTCCTCATCAGAAGACAGGCGAAGGATAATCGTAGTAGCAAACTTTGTTCCTCTCAATGCTCAACAGGATGATTCTAGCAAGTGGTGCTTTAGCTATGATGAAGATTCCATTTTATTGCAACTAAAGGATGGTATATCTCATGATATTGATGTTTTTTATGTTGGATCTTTGCCTGTTCATGTTGAAAAAGGAAAACAAGAGCAAGTTTCTGTTGAGTTGCTGGAGGAATTCAAGTGCTTGCCCATATTTATTCCACCACACACCCAAGAAAGGTACTATGATGGATTTTGCAAGCAGTATTTATGGCCTCTAATCCATTACATGATGCCTATGAATTCAGCTTATGGCAATCACTTTGATGTGAAACTTTGGAGAGCTTATGTGTCTGTTAATGAAAATTACACAGATAAGGTCATTGAACTTATTAATGACACAGAAGAAGATTATGTGTGGATTCATGATTATCATCTTATGGCATTACCAGTGTTTCTGCGTAGGCGGTATCATCGGTGCAAGCTAGGATTTTTCCTCCACAGTCCTTTTCCTCCCTTTGAAATTTATAACACTCAGCCTATTGGATTGCACATTTTGAAGGCTCTGCTCAATTCAGATTTAATAGGCTTCCAAACATATGAATATGCTCACCACTTTTTGTTTTGCTGCAGTCAGATGCTTGGCTTGGAATATGAATTCAAAAGTGGTTACATGGAGATTGAATACTTTGGCAGAAAGGTGAGCATTACAATTTTGCCTTCTGGGATTCATATGGGCCGGCTTCATTCTTCCTTAAACCACCCATCTTCTTTGGTTAAAGTCAGAGAAATCCGTGAAAAATTTACAGGGAAAACACTCATTCTTGGTGTTGATGATTTGGATATATTCAAAGGCATTGGTCTAAAGCTCTTGGCCATAGAACAACTCCTACTAAAGAGGCCATCTTTGAGAGGCAAATTAGTTGTTGTCCAAATTTTGAATCCCCCAAGAAGAACTGGCAGAGATGTTGAGGAAGCAAATAGAGAGACATACCTCACTGCTGAAAGGATCAATGAAAGTTTTGGTTGCGCCGGTTATAAACCCATCATTATAATCAATCGTCCTACTCCTTTCTACGAGAAGGCAGCTTATTATGCTCTAGCAGAATGTTGCGTTGTGAATGCAGTGAGGGATGGTATGAACTTAGTCCCGTACATGTATATTGCTTATAGGCAGGGGACTCCAGAGATGGATGAAGTATTACATATCAATTCTGAATCGCTTCATACAAGTGCGCTTGTTGTTTCTGAGTTCATAGGTTGCTCATTATCTCTTAGTGGAGCTTTCAGGGTGAACCCTTGGGACATAAATGCTGTGGCTGAAGCATTAAGTTCAGCCATTGACATGCCTGTTAAACAAAAGCACTTGAGCCATGAGATACACTTCCAACATGTTAGCTCTCGTGATGTGGCTTATTGGGCTCGAAGTTTTATGCAAAATCTTGAGCGTTCATGCATCAACCACCATGCTAGCCATTGCTTGGGCCTTGGGTTAAGTTTTAGTTTCAGAGTCATGTCATTTCCTCTGAATTTTAGTAAGCTATCCATCGAGCATGTTGTCTCTGCATATGAAAAGACTAAGCATAGGGTGATATTTTTGGACTTTGATGGTACAATTGTTCCACAAACTTCCCTAGTGAAAACCCCTAGTTCTGAACACATATCTGTTATCAATGACCTCTGCAATGACCTGAAGAACACCGTGTTTATAGTAAGTGGCCGTGGTAAGTTCCCATTTAGTGATTGGTTTGATTCATGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTACTTTATAAAGTGGGATAAAAATTCAAACTGGGAAACAAGCGGTTCAGTCACTGATTTTTCTTGGAAAAGCATTGTTGAACCTAAAATGAGATCATACTCCGAATTAACCAGTGGCACCTATATAGAGAGAAAGGAGAGTGGCTTGGCTTGGCATTATCATAAAGATGGTTGTTTTCGTTCTGATTATGGAAGTTTTAAAGCCAAGGAGTTGTTGGATCACCTTCAAAGTGTTCTTGCAAATGAGCCAGCAGTTGTTCAAAAGAGACATGATATTGTTGAAGTCAAACCACAGGGAATTACTAAAGGCATAGTCATAGAGAAGGTTCTTTCTACGCTAAAAATGAAAGGGATATCAGTGGATTTTGTGCTGTGCATCGGGGACGATGAGAATATGTTTCAAAGCATGTCAAGCCAAGCTCATAGTGGAGTTTTATCTGCAGAAGCAGAGATATTTACATGCACTGTTGAAGTGAAACCAAGCAAAGCTATGTACTTTTTAAATGATACTAATGAAGTGAAGAGTCTGCTTCAAGGCCTTGTTGCTGCTTCAGGGTCTGAATCAAAAGAAGATGATGATGAGAGGGAATATTCCTTTTGA 2559 0.3947 MVLGPYFNLFDAIRGVNSSSPQSSRALPRVMNDPRIMSNDDGDPYDSSSEDRRRIIVVANFVPLNAQQDDSSKWCFSYDEDSILLQLKDGISHDIDVFYVGSLPVHVEKGKQEQVSVELLEEFKCLPIFIPPHTQERYYDGFCKQYLWPLIHYMMPMNSAYGNHFDVKLWRAYVSVNENYTDKVIELINDTEEDYVWIHDYHLMALPVFLRRRYHRCKLGFFLHSPFPPFEIYNTQPIGLHILKALLNSDLIGFQTYEYAHHFLFCCSQMLGLEYEFKSGYMEIEYFGRKVSITILPSGIHMGRLHSSLNHPSSLVKVREIREKFTGKTLILGVDDLDIFKGIGLKLLAIEQLLLKRPSLRGKLVVVQILNPPRRTGRDVEEANRETYLTAERINESFGCAGYKPIIIINRPTPFYEKAAYYALAECCVVNAVRDGMNLVPYMYIAYRQGTPEMDEVLHINSESLHTSALVVSEFIGCSLSLSGAFRVNPWDINAVAEALSSAIDMPVKQKHLSHEIHFQHVSSRDVAYWARSFMQNLERSCINHHASHCLGLGLSFSFRVMSFPLNFSKLSIEHVVSAYEKTKHRVIFLDFDGTIVPQTSLVKTPSSEHISVINDLCNDLKNTVFIVSGRGKFPFSDWFDSCENLGIAAEHGYFIKWDKNSNWETSGSVTDFSWKSIVEPKMRSYSELTSGTYIERKESGLAWHYHKDGCFRSDYGSFKAKELLDHLQSVLANEPAVVQKRHDIVEVKPQGITKGIVIEKVLSTLKMKGISVDFVLCIGDDENMFQSMSSQAHSGVLSAEAEIFTCTVEVKPSKAMYFLNDTNEVKSLLQGLVAASGSESKEDDDEREYSF 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0636 852 FunFam Alpha,alpha-trehalose-phosphate synthase 308 523 - -
Acco13g0636 852 FunFam Trehalose-6-phosphate synthase 8 49 307 - -
Acco13g0636 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 585 702 - -
Acco13g0636 852 Pfam Glycosyltransferase family 20 54 539 IPR001830 GO:0003824|GO:0005992
Acco13g0636 852 Gene3D Glycogen Phosphorylase B; 307 524 - -
Acco13g0636 852 Pfam Trehalose-phosphatase 589 823 IPR003337 GO:0003824|GO:0005992
Acco13g0636 852 NCBIfam HAD-IIB family hydrolase 588 784 IPR006379 -
Acco13g0636 852 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 718 847 - -
Acco13g0636 852 SUPERFAMILY HAD-like 586 834 IPR036412 -
Acco13g0636 852 Gene3D Glycogen Phosphorylase B; 46 306 - -
Acco13g0636 852 MobiDBLite consensus disorder prediction 18 49 - -
Acco13g0636 852 CDD GT20_TPS 54 539 IPR001830 GO:0003824|GO:0005992
Acco13g0636 852 CDD HAD_TPP 587 826 - -
Acco13g0636 852 NCBIfam trehalose-phosphatase 584 834 IPR003337 GO:0003824|GO:0005992
Acco13g0636 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 541 - -
Acco13g0636 852 Gene3D - 718 850 IPR023214 -
Acco13g0636 852 Gene3D - 585 686 IPR023214 -
Acco13g0636 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 835 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0636 Acco-ChrAcco13 4648962 4651689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0636 21 843 Trehalose Biosynthesis Gene Families AT1G23870 57.503 0.0 989
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2597 04 42876630 42879441 Acco13g0636 13 4648962 4651689 CCT
Acco13g0636 13 4648962 4651689 Acco13g0636 13 4648962 4651689 ECH