Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0631 ATGAACGACATTTTTATTTCTCTGATTCTGCTCTTTCTGGGTATTGCCGCTTTGGTGTTGATCCATGTGTTCGTTGTCGGGAGAGCTCTGAGAAGAGGAAATCATCATCAAGGTGAGAATGAAGAACAGAGCAATGGCGATTTTGATGGGATTAGGACGAAGAGAATGTCAATTCAAGAGGTGAAGGATCTCCCCTGTTTTGAGTATGAGGAAACAGAGAAGAAAGGAGCTAGTAGCAGCAGAGTCACTGTGGATTGTGCAGTTTGCTTAGAAAGCTTCAAGGATGGTGATGTGTGCAAGTTCTTACCAAATTGCTCGCATAGCTTCCATGTCGCTTGCATAGATTCGTGGATTCTCAAAACACCCATTTGTCCAATTTGCAGAACCTGGGTTCATTCGCCAATCATTCCCAAGCTTAGTGTAACCCAACAGGCTGATGCTTCACAAAATGGTGTGATTGATATTGTATAA 471 0.4289 MNDIFISLILLFLGIAALVLIHVFVVGRALRRGNHHQGENEEQSNGDFDGIRTKRMSIQEVKDLPCFEYEETEKKGASSSRVTVDCAVCLESFKDGDVCKFLPNCSHSFHVACIDSWILKTPICPICRTWVHSPIIPKLSVTQQADASQNGVIDIV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0631 156 SMART ring_2 86 127 IPR001841 -
Acco13g0631 156 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 5 135 - -
Acco13g0631 156 FunFam RING-H2 finger protein ATL2K 56 134 - -
Acco13g0631 156 ProSiteProfiles Zinc finger RING-type profile. 86 128 IPR001841 -
Acco13g0631 156 Pfam Ring finger domain 85 128 IPR001841 -
Acco13g0631 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 134 IPR013083 -
Acco13g0631 156 SUPERFAMILY RING/U-box 61 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0631 Acco-ChrAcco13 4623410 4623880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0631 1 132 C3H Transcription Factor Family AT2G18670 32.576 1.70e-17 73.6