Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0628 ATGAAGGAGGGGGGCGAGGGGTTTGTGAGGGCGGATCAGATTGATCTGAAGAGCATAGACGAACAGCTAGAGAGACACATGAATAAGGCATTGACTATGGAGAAGAACAAGAGGAAAGAGGAAGGTGATGATTTTGCTACTACTAATATTGTTATCAGCCCTAGGGCCATCAAACCTAAGGGCGGGCCCACCACCAACTTCAGGAAGCAAAGGCAGGACTGGGAGATTGACCCTTCCAAGCTTATCATCAAGTCAGTTATTGCTCGTGGCACTTTCGGCACCGTCCACCGCGGTGTCTACGATGGCCAAGACGTCGCCGTTAAATTGCTGGACTTGGGTGAAGAAGGCCAAAGGACAGAAGCTGAAATTGCTTCACTCAGGGCGGCATTTATACAGGAAGTTGCTGTTTGGCATAAACTTGTTCATCCCAATGTCACTAAGTTTATAGGAGCAACCATGGTGTCATCAGAGCTACAGGTACAAACTGAGAATGGACTAATCAGCATGCCAAGCAATATCTTTTGTGTTGTTGTGGAGTATCTTCCCGGGGGTACACTGAAATCATACCTAATAAAAAACCGTAGAAGGAAGTTAGCTTTTAAGGTGGTCATCCAGCTTGCACTAGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAAAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGTTATTGGATAAGTCACGTACAGTTAAAATTGCCGACTTTGGGGTTGCACGTGTTGAGGCTTCAAACCCTAATGACATGACAGGGGAGACCGGCACACTTGGTTACATGGCTCCAGAGGTGTTAAATGGCAAGCCCTATAACAGGAAGTGTGATGTGTACAGTTTTGGTATCTGTTTATGGGAGATTTATTGTTGTGACATGCCATACCCTGACCTAAGTTTTTCAGAGGTCACCACAGCTGTTGTTCGTCAGAACCTGAGACCAGAGATACCAAGGTGTTGCCCAAGTTCTCTAGCAAATGTAATGAAGAGATGCTGGGATGTCAATCCTGAAAAGAGACCCGAGATGGATGAGGCGGTTTCCTTGCTAGAAGCCATTGACACATCAAAAGGTGGAGGCATGATCCCCCTTGATCAACAGCAAGGTTGTCTCTGTTTCCGCAAGTTCAAAGGACCCTGA 1155 0.4615 MKEGGEGFVRADQIDLKSIDEQLERHMNKALTMEKNKRKEEGDDFATTNIVISPRAIKPKGGPTTNFRKQRQDWEIDPSKLIIKSVIARGTFGTVHRGVYDGQDVAVKLLDLGEEGQRTEAEIASLRAAFIQEVAVWHKLVHPNVTKFIGATMVSSELQVQTENGLISMPSNIFCVVVEYLPGGTLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTTAVVRQNLRPEIPRCCPSSLANVMKRCWDVNPEKRPEMDEAVSLLEAIDTSKGGGMIPLDQQQGCLCFRKFKGP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0628 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Acco13g0628 384 Coils Coil 16 36 - -
Acco13g0628 384 FunFam Serine/threonine-protein kinase HT1 181 366 - -
Acco13g0628 384 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 69 358 - -
Acco13g0628 384 PRINTS Tyrosine kinase catalytic domain signature 326 348 IPR001245 GO:0004672|GO:0006468
Acco13g0628 384 PRINTS Tyrosine kinase catalytic domain signature 178 191 IPR001245 GO:0004672|GO:0006468
Acco13g0628 384 PRINTS Tyrosine kinase catalytic domain signature 216 234 IPR001245 GO:0004672|GO:0006468
Acco13g0628 384 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Acco13g0628 384 FunFam Kinase suppressor of Ras 1 70 165 - -
Acco13g0628 384 ProSiteProfiles Protein kinase domain profile. 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0628 384 Pfam Protein tyrosine and serine/threonine kinase 83 354 IPR001245 GO:0004672|GO:0006468
Acco13g0628 384 SUPERFAMILY Protein kinase-like (PK-like) 65 355 IPR011009 -
Acco13g0628 384 SMART serkin_6 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0628 384 Gene3D Phosphorylase Kinase; domain 1 69 164 - -
Acco13g0628 384 Gene3D Transferase(Phosphotransferase) domain 1 181 373 - -
Acco13g0628 384 CDD STKc_MAP3K-like 87 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0628 Acco-ChrAcco13 4611017 4614442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0628 1 316 MAP Kinase Kinase Kinase AT5G50000 80.625 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco13g0628 PK_Tyr_Ser-Thr 1.5e-62 CL0016