Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0621 ATGAAGAACTTTCACAGCTTCAAGCGGATTTCAACCTCAAAAAGGTCAGGAAGGAGGCTGTCACTTGGGGAATACAAGCGAGCAGTGTCATGGTCCAAGTACTTAGTCTCTTCAGGGGCTGCCATTAAAGGTGAAGGAGAAGAAGAATGGAGTGCTGATCTGTCTCAGTTGCTCATTGGATCCAAATTTGCTTCTGGAAGACACAGTAAACTCTACAGAGGAATTTACAATCATAAAGATGTGGCCATCAAGCTCATAAGCCAACCGGAGGAAGATGCAGACTTGGCTGCTTTACTTGAAAAACAATTCACTTCTGAAGTTGCCCTTCTCTTTCGTTTGCACCATCCAAATATCATCACTTTTTTTGCTGCTTGCAAGAAGCCTCCTGTGTTTTGTATAATTACTGAGTATATGGCTGGAGGATCACTGAGAAGTTATCTGCATCAGCAAAGGCCAAATTCAGTTCCACTTAATCTGGTTCTGAAATTAGCACTAGACATTGCAAAAGGGATGCAGTATCTTCATTCTGAGGGTGTGCTTCATAGGGATCTTAAATCAGAGAACTTGCTGCTTGGGGAAGATATGTGTGTGAAAGTAGCAGATTTTGGAATCTCTTGCTTAGAATCACAAATTGGTAGTGCAAAAGGATTCACAGGAACTTACCGTTGGATGGCTCCTGAGATGATCAAAGAAAAGCATCATTCTAAGAAAGTAGATGTCTATAGCTTTGCCATAGTTCTATGGGAGCTCTTAACTGGACTAACTCCATTTCACAACATGACACCAGAACAAGCTGCTTTTGCAGTCTCAATCAAGAATGCAAGGCCACCATTACCAGCTGATTGTCCAAAGGCATTTAGTCTTCTCATAAACAGATGCTGGTCAACCAATCCAGATAAAAGGCCGCATTTTGATGAGATTGTTTCTATTTTGGAGATGTATAGTGAATCCCTTGAAGAAGATCCTGAGTTCTTCTCAACTTATAACCCACCTCCTCCTCCTTTTGTGATGAGATTCTTACCAAAATGTATTACTAGTAGTCATGAATCTTTTTGA 1056 0.41 MKNFHSFKRISTSKRSGRRLSLGEYKRAVSWSKYLVSSGAAIKGEGEEEWSADLSQLLIGSKFASGRHSKLYRGIYNHKDVAIKLISQPEEDADLAALLEKQFTSEVALLFRLHHPNIITFFAACKKPPVFCIITEYMAGGSLRSYLHQQRPNSVPLNLVLKLALDIAKGMQYLHSEGVLHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHSKKVDVYSFAIVLWELLTGLTPFHNMTPEQAAFAVSIKNARPPLPADCPKAFSLLINRCWSTNPDKRPHFDEIVSILEMYSESLEEDPEFFSTYNPPPPPFVMRFLPKCITSSHESF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0621 351 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Acco13g0621 351 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Acco13g0621 351 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Acco13g0621 351 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Acco13g0621 351 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Acco13g0621 351 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 313 - -
Acco13g0621 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Acco13g0621 351 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0621 351 Gene3D Transferase(Phosphotransferase) domain 1 140 328 - -
Acco13g0621 351 SUPERFAMILY Protein kinase-like (PK-like) 48 341 IPR011009 -
Acco13g0621 351 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Acco13g0621 351 Pfam Protein tyrosine and serine/threonine kinase 59 311 IPR001245 GO:0004672|GO:0006468
Acco13g0621 351 CDD STKc_MAP3K-like 64 311 - -
Acco13g0621 351 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Acco13g0621 351 SMART serkin_6 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0621 Acco-ChrAcco13 4573957 4576300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0621 30 320 MAP Kinase Kinase Kinase AT1G62400 63.051 1.15e-133 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco13g0621 PK_Tyr_Ser-Thr 2.8e-64 CL0016