Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0619 ATGGAAGGTGGACATGAATATAAGAAAGGGCTCTGGAATTCTCAGGAAGACAAGATCTTAATGGACTACGTTAAGCAGCATGGCGTAGGAAAGTGGAACCGTATCGCTAAACTCACAGGATTGAAGAGATGTGGGAAAAGTTGCAGACTGAGGTGGATGAACTACCTGAGTCCGAATGTGAAGCGTGGGGATTTCTCAGAAGAAGAAGACGACCTCATTATTCGCCTTCACAATCTCCTTGGAAACAGGTGGTCATTGATAGCAGGGAGGGTGCCTGGTAGGACAGACAACCAAGTGAAGAACTATTGGAACACTCATTTGAGCAGAAAGTTGGGTGTTACTAAGAAGGCAAAGATCAAAACATGTCATCCTTCGAAACCAACCTCTAGTGAATCAAACGACATCGTCTCTAACAACGTAGAGTCAAACCCTTTGAAGGGAGCTTCAAACAAGGAGGAATTCAGAAGCATGGAGGAGATCATTATCAGCGATAATGATGATTTTGAGTTCAACTTTTTGTTTGCTAACAATGGAGTTGACCTTTTTGATCCTTCCCCCTTCACATCAGAGCCTTTCCAAGACTACTTTGTTGACTTTGATTGGGCTGCCTTGTAA 615 0.4341 MEGGHEYKKGLWNSQEDKILMDYVKQHGVGKWNRIAKLTGLKRCGKSCRLRWMNYLSPNVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHLSRKLGVTKKAKIKTCHPSKPTSSESNDIVSNNVESNPLKGASNKEEFRSMEEIIISDNDDFEFNFLFANNGVDLFDPSPFTSEPFQDYFVDFDWAAL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0619 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Acco13g0619 204 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Acco13g0619 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Acco13g0619 204 SMART sant 61 109 IPR001005 -
Acco13g0619 204 SMART sant 8 58 IPR001005 -
Acco13g0619 204 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Acco13g0619 204 FunFam Transcription factor WER 63 135 - -
Acco13g0619 204 CDD SANT 12 56 IPR001005 -
Acco13g0619 204 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Acco13g0619 204 MobiDBLite consensus disorder prediction 123 146 - -
Acco13g0619 204 CDD SANT 65 107 IPR001005 -
Acco13g0619 204 MobiDBLite consensus disorder prediction 121 150 - -
Acco13g0619 204 Gene3D - 9 61 - -
Acco13g0619 204 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Acco13g0619 204 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Acco13g0619 204 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 144 - -
Acco13g0619 204 FunFam MYB-related transcription factor 8 61 - -
Acco13g0619 204 Gene3D - 63 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0619 Acco-ChrAcco13 4560712 4561649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0619 5 113 MYB Transcription Factor Family AT5G40330 83.486 1.14e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g0619 Myb_DNA-binding 2.2e-15 CL0123