Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0610 ATGGGTTTTTCTTCTCTTCACGTCTGCATGGAATCATCAGATCACTGGCTCCAGGGCACAATTCACGAGGAATCTGGTGGATTGGATTCATCTTCACCATCAGGAGACATGCTTACATGCTCAAGGCCATTAATAGAGAGGAGGCTAAGACCACCACATGATCAAGCCATAAAGTGCCCTAGATGTGACTCCACACACACCAAGTTCTGCTACTACAACAATTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGTGGTACTCTCAGGAACATCCCTGTTGGTGGTGGTTGCAGAAAGAATAAGAAAGTCTCCAAGAAATCCAACAATAATAATGACCCATCACACAATAATAACCAAAACCACCAGCCATTATTATTGCAGCCTGCTTCAGGAATAGCCACCTCTTATCACCCTAAAGACCACCTTCAACTTTCTTTCCCAGATGCTGCACAGTTTTCTCACTTTGGTAACTTAATGGGAAACCCTAATTTCATGCTTGAGAATAACCCTAGGCCTATTGACTTCATGGACAGTAAGCTGGAAGGGATAATTGGGAGTACTTCTTCTAGAAACTTCCATTTTCTGGGAAACAGTGACATGGCTATGGGAATTGGCACTGGAGACATTAGTGGTCATCATCACAATGGGTTGCCACCAAATTTTCACAGTCTTTGCTCTCCAGCAGGATTTATGGGTATTTCATCATCTTTTGATGGTAACAACAACAATAACAGTGCGACTAATTATAATATCATGGACTCTTCTTCTTGCCAAAGACTGATGCTGCCATATAATGAGGACCCAAATGATGCCAACATTGATGTGAAACCAAACCCTAAGCGTTTGTCTCTTGAGTGGCAGGACCAGGGTTGCTCCGATGCTGGAAAAGAGTCTTCGTCGTTTGGGTATCTTAACGGTCTAGGATCATGGACCGGCATGATCAACGGCTACGGTTCATCCACGACGACAAACCCTCTGGTCTAA 1011 0.4411 MGFSSLHVCMESSDHWLQGTIHEESGGLDSSSPSGDMLTCSRPLIERRLRPPHDQAIKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSKKSNNNNDPSHNNNQNHQPLLLQPASGIATSYHPKDHLQLSFPDAAQFSHFGNLMGNPNFMLENNPRPIDFMDSKLEGIIGSTSSRNFHFLGNSDMAMGIGTGDISGHHHNGLPPNFHSLCSPAGFMGISSSFDGNNNNNSATNYNIMDSSSCQRLMLPYNEDPNDANIDVKPNPKRLSLEWQDQGCSDAGKESSSFGYLNGLGSWTGMINGYGSSTTTNPLV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0610 336 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
Acco13g0610 336 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Acco13g0610 336 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Acco13g0610 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 46 217 IPR045174 GO:0003700|GO:0006355
Acco13g0610 336 MobiDBLite consensus disorder prediction 102 132 - -
Acco13g0610 336 MobiDBLite consensus disorder prediction 116 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0610 Acco-ChrAcco13 4425585 4427088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0610 1 336 C2C2-Dof Transcription Factor Family AT5G62940 42.640 7.52e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco13g0610 zf-Dof 2.5e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2578 04 42664628 42665859 Acco13g0610 13 4425585 4427088 CCT