Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0573 ATGGGTCGGCATTCTTGTTGTGTGAAGCAAAAGTTGAGGAAGGGTTTGTGGTCTCCTGAAGAAGACGAGAAGCTTTTCAACCACATTACTCGATTTGGTGTTGGCTGCTGGAGCTCCGTCCCTAAACTTGCTGGGCTCCAAAGATGTGGAAAGAGTTGTAGATTGAGGTGGATAAACTATCTGAGGCCTGATTTGAAAAGAGGCATGTTCTCTCAACAAGAGGAGGATATCATTCTGAGCCTCCATCAAGTTCTCGGCAACAGGTGGGCGCAGATAGCAGCACAGTTACCTGGAAGAACAGATAACGAAATAAAGAACTTCTGGAATTCATGCTTGAAGAAGAAGCTGATGAAGCAGGGCATTGACCCAGCCACCCACAAGCCCTTCACCCAACAACCTCATCAAATAAAGCAGGAGCTCATAAACAATAGCTTATTAGAGACACCACCACCACCACCAGAAGCAGAACCAATAATGTCTCTGCAAAATATGCATCTTCATTTCTCGAACTTATTAGCCTCCTCACAGGGACCACCTTTTCTGATAAGCAGCGATTCCAGTTATTACGATCCAGCTGTTTTAACAACAGAAGCGGCCTCCAGAGACCAAATCCTCTTGATGAGCATGAGCAATCATAATAAGCCTCACGAATGGGTCGACCCCTTGTCGTACTACGACTCATTACCGAGTCAGCATCATTTTGGAACGAGTTCAAGCTACGGGATGATGTGTTCATCAATGCCGAGTTTGACGAGTTCGGATCAGAACAACCTGTCGGCGATTACGGAATTCTCAGACAACAATAATTCGGGTTCCAAGATCACTTCAAGCAACAACAGCTCAAATATGGTGGAGAATCATAATAATAATGGAGGGATGGTATCGTGGGAGGGATCCGAGAACAAGATGGCGGAGGGTTCTTTTCAGTTTCATCATCAAGAGAATGGTTTAAAATCAGAGGAAGTGATGACCAACACATGTTCTTCGTGGCAAGAAATTACAGTGCATCAGCTTCAGAATCACACTTCCATAGATTTCAACACCTATCCGTTAACGTCATTCTCACAAGATCTAACGGCAGCGACGTCTTATGATGTGTTCCGCCATATATGA 1113 0.4474 MGRHSCCVKQKLRKGLWSPEEDEKLFNHITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDIILSLHQVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPATHKPFTQQPHQIKQELINNSLLETPPPPPEAEPIMSLQNMHLHFSNLLASSQGPPFLISSDSSYYDPAVLTTEAASRDQILLMSMSNHNKPHEWVDPLSYYDSLPSQHHFGTSSSYGMMCSSMPSLTSSDQNNLSAITEFSDNNNSGSKITSSNNSSNMVENHNNNGGMVSWEGSENKMAEGSFQFHHQENGLKSEEVMTNTCSSWQEITVHQLQNHTSIDFNTYPLTSFSQDLTAATSYDVFRHI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0573 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco13g0573 370 Gene3D - 11 67 - -
Acco13g0573 370 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco13g0573 370 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Acco13g0573 370 CDD SANT 70 109 IPR001005 -
Acco13g0573 370 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco13g0573 370 FunFam MYB transcription factor 11 67 - -
Acco13g0573 370 CDD SANT 17 61 IPR001005 -
Acco13g0573 370 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Acco13g0573 370 PANTHER MYB DOMAIN PROTEIN 55 1 309 - -
Acco13g0573 370 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco13g0573 370 FunFam Transcription factor MYB86 69 138 - -
Acco13g0573 370 SMART sant 66 114 IPR001005 -
Acco13g0573 370 SMART sant 13 63 IPR001005 -
Acco13g0573 370 Gene3D - 69 141 - -
Acco13g0573 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0573 Acco-ChrAcco13 4122615 4123885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0573 1 132 MYB Transcription Factor Family AT1G57560 79.545 8.99e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g0573 Myb_DNA-binding 7.8e-13 CL0123