Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0538 ATGCAAATATTCCACACGCTTAGTCGCTATAAGAGTTCAACAAATGATCGAACCCACTCGAGCAAGAAGCCTCAGCTTCCCCGTGTTTCGTCTTCCTCTCTGGTCATGGCTCTCCCTACTGCAAATTCACACCTCTTATTACTCTTTTCATTCTTCTCTCTTTTCTTCTTCATCCTCCATGCCAAAATCGATATCAATCCTTCAGATCTCAAAGCTTTCTTGATTTTTCACAAGGACTTGGGTTTCAACGGTCAACGCCAACCGTTTACCAATCACCCATGTGACACTGAAGGTGTTTTCTGCGGGAGGAGGCTCTCCGGCAACGAGAGCTATGTTCTCAGAATCACCAGAATCATCTTCAACTCTAAGAAGCTTAATGGAGTTTTGTCTCCTGCCATTGGCCGTCTCTCTGAGCTCAAGGAGCTTTCTCTTTCGGACAACCAACTCACGAGTCAAATTCCAACTCAGATTGCTGACTGCCGGAAGCTGGAGATTCTTGACATCGGAAACAACAGCTTCTCCGGCGAGGTCCCATCTGAATTGTCCTCCCTCATTCGACTCCGAGTGCTTGACATATCTTCCAACAAATTCTCGGGCTATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAAACTCTCTCTGTGGCGGACAACCTCTTCACGGGGAGAATTCCGGCGTCGGTTCGCTCATTTCGCAATCTCCAACTCTTCAACTTCTCTGGGAATCACTTCCTTGAAATTCCTCCCCCATTGTTGAAGAAATTCGGACACTCAGCACCTGTTATCCCCAAAAGATACATCCTCACCGAGAATTCAGCTCCACCAACAAGTCAAGGAATTTCAGCTCCTCCTCCAAAAGCCAGAAAGCCCCGTTCTAATACTTCATCAATTCAAGATGCTCCGGCTCAAGCTCCAACAGCACAACACCACGAACACAAGTCAAAAAAGAGGAAACTAGGTGGATGGATTCTTGGATTCCTAGCAGGAGCATTCGCTGGGAGCATATCTGGGTTCATATTTTGTTTGCTGTTCAAGTTGGCCGTGGCTGTGATCAAAGGAGGAGGGAAGAGCTCTGGCCCTGCAATCTACAGTCCATTGATTAAAAAAGCTGAGGACTTGGCCTTTCTGGAGAAAGAAGATGGAGTAAGCTCCTTAGAAATCATCGGAAAAGGAGGATGTGGAGAAGTTTGCAAGGCTGAATTACCGGGAAGCAACAAAATCATTGCTATCAAGAAGGTCGTTCAACCATCAAAAGATGCAGCTGAACTCTCTGAAGAAGACAGTAAGCTTCTGAACAAAAAAATGCGCCAAATTCGATCAGAGATCAACACGGTCGGCCAAATTCGACACCGAAACCTACTGCCTCTGCTAGCTCACGTATCCAGGCCCGATTGTCACTACCTTGTGTACGAGTACATGAAGAATGGGAGCTTGCAAGATGTGTTAAATCAAGTCCAAGCAGGCGCAAGAGAGTTGGATTGGTTGGCACGACACAAGATTGCAGTTGGAGTAGCATCTGGCCTAGAGTACCTTCACATGAATCATACTCCCCGTATTATTCACAGGGATCTCAAGCCTGGGAATATTCTTCTTGATGATGACATGGAAGCGAGAATTGCAGATTTTGGGCTTGCAAAAGCAATGCCAGAAGCTTATACACATGTCTCAACTTCAAACGTGGCTGGAACTGTGGGCTACATAGCACCAGAATATTACCAGACTCTGAAATTCACTGACAAGTGTGACATTTACAGCTTTGGGGTTGTTCTTGGGATCTTGGTGATGGGGAAGATTCCATCTGATGCTTTCTTCCAGGAAACTGAGGAGCTGAGTTTGGTGAAGTGGATGAGGAACGTGATGACGTCAGATAATCCGACGAGGGGGATTGATGAAAAGCTCAGAGGAAATGGGTATGAGGAGCAGATGCTTCTGGTTCTTAAGATTGCTTTCTTTTGCACTCTTGATGATCCCAAAGAGAGGCCTAACAGTAAAGACACCAGATGCATGTTGTTCCAAATTAAGCACGGAAGGGGATTCTCTTCTCATCTTTTTTCTCATATTCTCTCATCATCTAATCTGTACCATTGA 2088 0.4559 MQIFHTLSRYKSSTNDRTHSSKKPQLPRVSSSSLVMALPTANSHLLLLFSFFSLFFFILHAKIDINPSDLKAFLIFHKDLGFNGQRQPFTNHPCDTEGVFCGRRLSGNESYVLRITRIIFNSKKLNGVLSPAIGRLSELKELSLSDNQLTSQIPTQIADCRKLEILDIGNNSFSGEVPSELSSLIRLRVLDISSNKFSGYLNFLKYFPNLETLSVADNLFTGRIPASVRSFRNLQLFNFSGNHFLEIPPPLLKKFGHSAPVIPKRYILTENSAPPTSQGISAPPPKARKPRSNTSSIQDAPAQAPTAQHHEHKSKKRKLGGWILGFLAGAFAGSISGFIFCLLFKLAVAVIKGGGKSSGPAIYSPLIKKAEDLAFLEKEDGVSSLEIIGKGGCGEVCKAELPGSNKIIAIKKVVQPSKDAAELSEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLNQVQAGARELDWLARHKIAVGVASGLEYLHMNHTPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPEAYTHVSTSNVAGTVGYIAPEYYQTLKFTDKCDIYSFGVVLGILVMGKIPSDAFFQETEELSLVKWMRNVMTSDNPTRGIDEKLRGNGYEEQMLLVLKIAFFCTLDDPKERPNSKDTRCMLFQIKHGRGFSSHLFSHILSSSNLYH 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0538 695 MobiDBLite consensus disorder prediction 288 303 - -
Acco13g0538 695 Pfam Protein kinase domain 384 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0538 695 Gene3D Ribonuclease Inhibitor 77 202 IPR032675 -
Acco13g0538 695 Gene3D Ribonuclease Inhibitor 203 257 IPR032675 -
Acco13g0538 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Acco13g0538 695 Gene3D Phosphorylase Kinase; domain 1 382 476 - -
Acco13g0538 695 MobiDBLite consensus disorder prediction 1 26 - -
Acco13g0538 695 SUPERFAMILY L domain-like 110 254 - -
Acco13g0538 695 SUPERFAMILY Protein kinase-like (PK-like) 375 673 IPR011009 -
Acco13g0538 695 Pfam Leucine rich repeat 138 197 IPR001611 GO:0005515
Acco13g0538 695 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 113 674 - -
Acco13g0538 695 MobiDBLite consensus disorder prediction 272 314 - -
Acco13g0538 695 FunFam Leucine-rich repeat receptor protein kinase EMS1 109 204 - -
Acco13g0538 695 SMART serkin_6 382 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0538 695 ProSiteProfiles Protein kinase domain profile. 382 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0538 695 Gene3D Transferase(Phosphotransferase) domain 1 477 677 - -
Acco13g0538 695 FunFam Leucine-rich repeat receptor-like protein kinase 473 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0538 Acco-ChrAcco13 3898013 3900100 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0538 36 675 Receptor kinase-like Gene Family AT2G31880 61.256 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Acco13g0538 Pkinase 1.6e-43 CL0016