Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0532 ATGAAGCAGCAGTCATCATTTCGCCTCGCAACAATGGCCGTCGAAACCATCGCACCGACCGGTATTTCTCCCATCACCGGCATCGACTGCCTGAGCAGTCGGGTCTTACCTGTACCTGATGTTTTCATTCACACATCCAGCGGCGCGCGCATTCCCGCGCACACAAGCATTCTGGCTTCAGCGTCGCCGGTTTTGGAGAATATCATAGATCAGCCACGCAAGCATAGGAGCTCCGAGAGAATCATTCAAATTCACGGTGTTCCTTGCGACGCCGTCGCTGCTTTTCTTGGCTTCCTCTATAGTTCCAGGTGCACGGATGAGCAGATGGAGAAGTATGGGGTTCATCTGCTCGCATTGTCCCACGTGTATTTGGTGCCACAACTGAAGCAGAGGTGCATCAAGGTGCTTGCCGAACGGTTAACGATCGAGAACGTGGTGGATTTGCTCCAACTCGCGAGGCTCTGCGACGCGCCTGATCTTTACATCAAGTGTATGAGGCTTCTCACCAATCACTTCAAATCTGTGGAAGCAACAGAGGGCTGGAAATTCTTGCAGAAGTATGATCCATGGCTCGAGCTCGAGATCCTCCAATTCATGGATGAGGACGAATCGAGGAAGAAGAAATCGAGGAAGCGGAAGGAGGAGCAGAGGCTGTACGCAGAGCTGAGCGAGGCGATGGAGTGTCTGGAACACATATGCACGGAAGGTTGCACCGACGTTGGGCCTTACGGCGTGGAGCTCCGGAAAGAGAGGAGGCCGTGCAGCAAATACGCCACGTGTCACGCCATTCAGCTCTTAATCACGCACTTCGCTACGTGTAGCAAGAGGATGAACGGACGGTGCTTGCGCTGCAAGCGAATGTGGCAGCTCTTCCGACTTCATTCCTACATTTGCCAACAAACCCATTCTTGCAAGGTTCCTCTTTGCAGGGAAATGCAAATGAAAATGCAGCAAGTGAAAAGGAAAGATGACCCAATGTGGAAACTACTGGCAAGAAAAGTGGCCTCCGCTAGAGTCATGTCTACACTCTCTTTGCCAAAGAGGAAGAGAGACGATGAAATTAGAATAAGCATGGACAACTATGGGATTAGAAGTTTCAAATCAAAACGATAA 1113 0.5094 MKQQSSFRLATMAVETIAPTGISPITGIDCLSSRVLPVPDVFIHTSSGARIPAHTSILASASPVLENIIDQPRKHRSSERIIQIHGVPCDAVAAFLGFLYSSRCTDEQMEKYGVHLLALSHVYLVPQLKQRCIKVLAERLTIENVVDLLQLARLCDAPDLYIKCMRLLTNHFKSVEATEGWKFLQKYDPWLELEILQFMDEDESRKKKSRKRKEEQRLYAELSEAMECLEHICTEGCTDVGPYGVELRKERRPCSKYATCHAIQLLITHFATCSKRMNGRCLRCKRMWQLFRLHSYICQQTHSCKVPLCREMQMKMQQVKRKDDPMWKLLARKVASARVMSTLSLPKRKRDDEIRISMDNYGIRSFKSKR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0532 370 SMART BTB_4 39 140 IPR000210 GO:0005515
Acco13g0532 370 Coils Coil 205 232 - -
Acco13g0532 370 Gene3D TAZ domain 214 320 IPR035898 -
Acco13g0532 370 ProSiteProfiles BTB domain profile. 39 108 IPR000210 GO:0005515
Acco13g0532 370 SUPERFAMILY TAZ domain 214 313 IPR035898 -
Acco13g0532 370 FunFam BTB/POZ and TAZ domain-containing protein 2 141 211 - -
Acco13g0532 370 Pfam BTB/POZ domain 39 138 IPR000210 GO:0005515
Acco13g0532 370 FunFam BTB/POZ and TAZ domain-containing protein 2 212 338 - -
Acco13g0532 370 Gene3D - 141 213 - -
Acco13g0532 370 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 38 350 IPR044513 -
Acco13g0532 370 Gene3D Potassium Channel Kv1.1; Chain A 36 140 IPR011333 -
Acco13g0532 370 SUPERFAMILY POZ domain 40 170 IPR011333 -
Acco13g0532 370 SMART TAZ_2 216 310 IPR000197 -
Acco13g0532 370 Pfam TAZ zinc finger 223 309 IPR000197 -
Acco13g0532 370 CDD BACK 141 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0532 Acco-ChrAcco13 3844470 3847895 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Acco13g0532 BTB 5.6e-14 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0532 13 3844470 3847895 Acco13g0532 13 3844470 3847895 ECH