Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0522 ATGGGAAAACTGGTCAAAAAAGGGGAGTTGGAATCAACACTGTTGCTAATGGCGGCTGCAGCAGTAGCCGAGGCTAGGAAAGCCCCTCGACCAGGTAAGGGTGGGTTCGAAGCCCATGGCCTTTCTGAAGAGGAAGCCCGCGTTCGAGCCATTGCAGAGATCGTCAACTCTATGGTGGACCAATCCCGGAAAGGCCAGAACGTCGACTTGAATGCGCTCAAATCCGCAGCATGTCGCAAGTATGGACTTTCACGTGCACCCAAGCTAGTGGAGATGATAGCCGCCCTACCGGAGACGGAAAAAGAGGCGCTGCTGCCAAAGCTTCGTGCTAAACCTGTCCGAACTGCCTCTGGAATAGCCGTCGTGGCTGTCATGTCCAAGCCACACCGTTGCCCTCACATAGCAACTACTGGTAATATTTGCGTATACTGCCCCGGAGGGCCTGACTCGGATTTTGAGTACAGTACTCAGTCTTACACTGGTTACGAACCAACTAGTATGCGAGCAATTCGAGCTAGGTATAACCCATATGTCCAAGCTAGAAGCAGGATAGATCAGCTTAAGCGTTTGGGTCACAGTGTAGATAAGGTTGAGTTCATTTTAATGGGTGGTACTTTCATGTCCCTTCCAGCAGACTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCTGGACACACTTCTGCAAATGTTGAAGAGGCAGTTGCCTACTCTGAGCATAGTGCAACAAAATGTATTGGCATGACAATTGAAACGAGGCCAGATTATTGTCTTGGGCCTCACTTGCGGCAAATGCTTTCTTATGGTTGTACACGATTGGAGATTGGAGTACAAAGCACCTATGAGGATGTTGCTCGAGACACTAACAGAGGGCATACAGTAGCTGCTGTTGCAGATTGTTTTTGCTTGGCAAAAGATGCTGGTTTTAAGGTGGTTGCTCACATGATGCCCGATCTTCCAAATGTTGGTGTTGAGAGGGATTTGGAAAGCTTTCGGGAATTTTTTGAGAGTCCCTTGTTTAGAGCAGATGGACTTAAAATATACCCTACACTTGTAATACGTGGAACTGGGCTTTACGAGCTCTGGAAAACTGGCAGGTATAGAAATTATCCGCCTGAGCAACTGGTGGACATCATAGCAAGGATCCTCGCCATGGTGCCTCCTTGGACTCGTGTTTATAGAGTTCAGCGGGATATTCCCATGCCTCTGGTTACTTCCGGGGTTGAGAAAGGTAATCTAAGGGAGTTAGCTTTGGCTCGGATGGAAGACCTAGGCTTGAAATGTCGTGATGTCCGAACCCGAGAAGCTGGAATCCAGGACATTCACCACCAAATCAAGCCTGAAGAGGTGGAGCTTGTGCGTCGCGATTATACAGCAAATGAAGGTTGGGAAACATTTCTGTCATATGAAGATACTCGACAGGATATTCTTGTTGGTTTGCTGCGTCTTCGAAAATGTGGTCGGAATACTACTTGTCCAGAACTTATGGGGAGGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCTGTTCCAGTCCATGGGCGGGATGCTGACAAGCTGCAACACCAGGGTTATGGTACACTGTTAATGGAGGAGGCGGAACGAATTGCCCGCAGGGAACATAGATCAACAAAAATAGCTGTAATATCGGGAGTAGGCACACGCCATTATTACAGGAAACTGGGTTATGAGCTTGAAGGGCCTTACATGGTGAAATATCTATCGTGA 1740 0.4759 MGKLVKKGELESTLLLMAAAAVAEARKAPRPGKGGFEAHGLSEEEARVRAIAEIVNSMVDQSRKGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPETEKEALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGRCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0522 579 PIRSF HAT_Elp3 36 579 IPR034687 -
Acco13g0522 579 FunFam Elongator complex protein 3 427 579 - -
Acco13g0522 579 Pfam Radical SAM superfamily 139 333 IPR007197 GO:0003824|GO:0051536
Acco13g0522 579 Pfam Acetyltransferase (GNAT) family 431 567 IPR000182 GO:0016747
Acco13g0522 579 SFLD Radical SAM 69 578 IPR007197 GO:0003824|GO:0051536
Acco13g0522 579 Pfam Radical_SAM C-terminal domain 345 424 IPR032432 -
Acco13g0522 579 SUPERFAMILY Radical SAM enzymes 151 390 - -
Acco13g0522 579 ProSiteProfiles Radical SAM core domain profile. 114 404 IPR007197 GO:0003824|GO:0051536
Acco13g0522 579 SMART MiaB 121 383 IPR006638 GO:0003824|GO:0051536
Acco13g0522 579 SFLD ELP3-like 69 578 IPR034687 -
Acco13g0522 579 CDD Radical_SAM 128 375 - -
Acco13g0522 579 Gene3D - 430 579 - -
Acco13g0522 579 NCBIfam tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 65 578 IPR034687 -
Acco13g0522 579 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 387 574 IPR016181 -
Acco13g0522 579 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 32 578 IPR039661 -
Acco13g0522 579 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 428 579 IPR000182 GO:0016747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Acco13g0522 Radical_SAM 1.7e-17 CL0036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0522 13 3769178 3773976 Acco13g0522 13 3769178 3773976 ECH