Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0515 ATGTATCCTCCTCTTTATAGGATCGTCAAGGATGAGATTAGTGAAGATGAGAATTCAGTACTAGGCCTCAGTCTTCGACTGGCGACAATGGGTTGCCACACTTATCCTCGTACTCCCACCTCGGACAACATTGCTGCTTCCCCCTGGATCCTTCCTCGTTCTGACGATGATGAAACCAAGAGGGACATAAAAATGTTCAAGAGAACCATAAGCATGTCCGATGTTACACGTGGAAGCTACAGTAATAGTATGAATACCGTGCCAAGGTTTCAATTCAGAGATCACATATGGACTTACAGTCAGAGGTACCTTGCAGCTGAAGCTTTTGAAGAGGCTGCAAAAGAGATGCTGATGATGGATGAAGCTGAGAAAGATGGATGTGCTGACGAAATGAGACTTGTTCAACTGCTAATTGCTTGCGCAGAAGCCGTGGCTTGTCGTGACAAATCACACGCTTCTAATTTATTATCTCAACTTGAAGCCAATTATGCTTTAGTGTTTGGTTCTTCTTTCCAAAGAGTCGCTTCTTGTTTCGTCCCTGCCCTAGCTCATCGTCTTGCCATGATTCAACCTGTTGGGGCTGCTGTGGAATCTAATAAACCCCCTATAATGAACATTATGGATACAGCTTCTGAGAATATGCAAGAAGCTTATAAATTGATGTACGAGATTTGCCCACATATTCAGTTTGGTCACTTTGTGGCTAACTCCACAATATCGGAAGCCTTTGAGGGTCAGAGTACTTTTCTTCATGTCGTTGACTTGGGGATGAGCCTTGCTCTGCCACATGGACACCAATGGCGAGGACTGATCCAGGGTCTCGCTAACCGCGCCGCCGGCCACCCTGTTATTCGCCGGCTTCGAATCACCGGGGTTGGACTCTGTATTGAGAGACTTCAGAACATAGGTGAAGAACTCGAGGTTTATGCGAAAACTCAGGGGATCAATCTGGAATTCTCAGCTGTTCATAAAAGCTTGGAAAATTTGCATCCTGATGATATCAAAGTTTATGAGGGTGAAACTCTTGTTGTGAACAGTGTTCTTCAGTTGCATTGTGTGGTGAAAGAAAGTCGTGGAGCTTTGAACTCTGTGCTTCAGGTGATCCATAAGCTTTCACCAAAAGTGTTTCTTATGGTTGAGCAGGACTCGAGCCATAACGGACCCTTCTTTCTTGGAAGATTTATGGAAGCTCTGCATTATTACTCTGCAATTTTTGATTCACTTGATGCTGCGTTGCCTAAGTATGACACGAAGAGGGCTAAGATAGAACAGTTTTACTTTGCTGAGGAGATAAAGAACATAGTGAGCTATGAGGGGCCGGCGAGGGTGGAGAGGCATGAGAGGCTGGAGCAGTGGCGGAGGAGGATGAGCCGAGCAGGCTTTCGGGCGGCGCCGATCAAGGCGGTGGGTCAGGCCAAGCAGTGGCTTCACAAGAAAGAGGTGGGTGATGGATATACGGTTGTGGAAGAGAAAGGATGCTTGGTTCTTGGTTGGAATTCAACGCCAATAGTTGCAGTTTCTTGCTGGAAATGCTAA 1536 0.4609 MYPPLYRIVKDEISEDENSVLGLSLRLATMGCHTYPRTPTSDNIAASPWILPRSDDDETKRDIKMFKRTISMSDVTRGSYSNSMNTVPRFQFRDHIWTYSQRYLAAEAFEEAAKEMLMMDEAEKDGCADEMRLVQLLIACAEAVACRDKSHASNLLSQLEANYALVFGSSFQRVASCFVPALAHRLAMIQPVGAAVESNKPPIMNIMDTASENMQEAYKLMYEICPHIQFGHFVANSTISEAFEGQSTFLHVVDLGMSLALPHGHQWRGLIQGLANRAAGHPVIRRLRITGVGLCIERLQNIGEELEVYAKTQGINLEFSAVHKSLENLHPDDIKVYEGETLVVNSVLQLHCVVKESRGALNSVLQVIHKLSPKVFLMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAALPKYDTKRAKIEQFYFAEEIKNIVSYEGPARVERHERLEQWRRRMSRAGFRAAPIKAVGQAKQWLHKKEVGDGYTVVEEKGCLVLGWNSTPIVAVSCWKC 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0515 511 Pfam GRAS domain family 133 510 IPR005202 -
Acco13g0515 511 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 113 505 IPR005202 -
Acco13g0515 511 ProSiteProfiles GRAS family profile. 124 510 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0515 Acco-ChrAcco13 3712480 3714015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0515 125 510 GRAS Transcription Factor Family AT1G14920 37.975 7.13e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco13g0515 GRAS 5.2e-109 CL0063