Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0506 ATGGCGAACCAAGTCGATCCCAGCTCAGGCTTTTGCCCTCAAACCAGAACATTCCATAGTCTTCGTCCTGACGTCCCTCTCCCTCCACCCTGTCAACCTCTCTCCATCACTGACTACGCTCTTTCACTCATCCCTCCGACCGCTTCCTCCACCACAGTCCTCATTGACTCCGCCGCCGACCGCCGCATCTCCTACTCCCTCTTTCTTCAACAAATCAAAAACCTCGCTTCCTCCCTCGCTTCCCTCACTCCTCTTTCTAAAGGCCACGTCGCCTTCATTCTCTCCCCTGCTTCTCTTCACATCCCAGTTCTTTACTACTCCCTTTTGTCTTTAGGAGTCACCATCTCACCTGCTCACCCTATGGGCTCTGAATCGGAGGTTGCTCATCAGGTTGAGCTCGCTCAACCTGTCATCGCATTCGCTACCTCCTCCACTGCTCACAAGATCCCTAAGCTTCGATACGGTACCGTCATAATCGACTCTCCTCAGTTCCTTTCCATGATCAATGGAACTTCCGGAAGTGGTAATGCTGATAACAGGGGAGTTCGAAGAGTTCAGATAAGCCAATCGGAGCCGGCAGCGATTCTCTTCTCATCTGGAACAACCGGGAGGGTGAAGGGTGTGTTATTGACTCACGGGAATTTGATTGCCCTAATTGGGGGATTTTACCACCTGAGGCACCTGATGGATTCTCCAGAGAATGAACCTGATCCGGTGTCCCTATTTACACTGCCACTTTTCCATGTGTTTGGGTTTTTCATGCTGATTAGGGCGATATCGATGGGGGAGACTCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGGATGTTAAAGGCGGTAGAAAGGTACAAGATTACTTACATGCCAGTTTCGCCGCCGCTTATTGTGGCGCTGGCTAAGTCGGAGTTAGTGAAAAAGTACGACCTTAGCTCGATGAGGTTGCTCGGGTGCGGCGGCGCGCCACTTGGCAAGGAGGTGGCCGAGAACTTCCATGCCCGATTCCCTGATGTGGAAGTAGTGCAGGGGTATGGCCTGACTGAAAGTGGAGGGGGTGCAACAAGAATGATAGGGCCTGAAGAGGCTAAGCGTCATGGCTCTGTGGGTCGACTTGCAGAGAATATGGAAGCCAAGATTGTGGATCCTGTGACGGGAGAGTCATTGCCTCCTGGTCAGAGAGGGGAACTATGGTTGAAAGGTCCAACCATAATGAAAGGTTATGTAAGAAATGAGGAAGCAACGGCTGAGACATTGGATCCGGAGGGATGGCTCAAGACTGGAGATCTTTGTTATTTTGATTCTGTTGGTTTCCTCTACATTGTAGACAGGCTTAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTGGAGCATATACTTCATACCCACCCTAATATTGCTGATGCTGCCGTAGTTCCGTACCCTGATGAAGAGGCAGGGCAAATTCCAATGGCATTTGTGGTAAGAAAGCCTGGAAGCAATATCAACGCAGATGAGGTTATGGATTTTGTGGCAAAGCAGGTTGCGCCGTACAAGAAGATACGACGTGTTGCTTTCATTAATGCTATACCAAAGAATCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTCGATTCTGCACTATCAAGTGGTTCCTCCAAATTGTAA 1656 0.494 MANQVDPSSGFCPQTRTFHSLRPDVPLPPPCQPLSITDYALSLIPPTASSTTVLIDSAADRRISYSLFLQQIKNLASSLASLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTISPAHPMGSESEVAHQVELAQPVIAFATSSTAHKIPKLRYGTVIIDSPQFLSMINGTSGSGNADNRGVRRVQISQSEPAAILFSSGTTGRVKGVLLTHGNLIALIGGFYHLRHLMDSPENEPDPVSLFTLPLFHVFGFFMLIRAISMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLIVALAKSELVKKYDLSSMRLLGCGGAPLGKEVAENFHARFPDVEVVQGYGLTESGGGATRMIGPEEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQRGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSVGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPNIADAAVVPYPDEEAGQIPMAFVVRKPGSNINADEVMDFVAKQVAPYKKIRRVAFINAIPKNPAGKILRRELVDSALSSGSSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0506 551 CDD 4CL 28 539 - -
Acco13g0506 551 SUPERFAMILY Acetyl-CoA synthetase-like 59 544 - -
Acco13g0506 551 Gene3D - 445 545 IPR045851 -
Acco13g0506 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 541 - -
Acco13g0506 551 Pfam AMP-binding enzyme 51 449 IPR000873 -
Acco13g0506 551 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Acco13g0506 551 Gene3D - 19 444 IPR042099 -
Acco13g0506 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Acco13g0506 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0506 Acco-ChrAcco13 3631104 3634071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0506 5 551 Monolignol Biosynthesis Gene Families AT5G63380 64.349 0.0 709