Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0493 ATGGCCGCCACCACCACCACCACCAGCAGCCTAGGCGAAGGTGCCGATGATCGACTTCTAGCCACGGCTCAGCAGATCGTCAGGAGCCTCAATACCCCCAAGGAGGTTCGTGAGGACATGCTTTTGATCTTCTCTAGCTTCGATAATCGCCTCTCCAGTATCACCGATCTCATCAACGGCGATGATTCCAAGTCTTCTACGGCTGAGGATGACCTTGACCGCTTCCAAGCTGCTGAGAAAGTTATCCTTCACTGGGATGGGTCTGGTTCTGGAGTAGCTCCCCGCCAATCCAACTCGCTTCTCCATTCTCGCGATGATGTTGTCGAGTATTTATCTGCGGTCGACGACATTATTCAGTGGATTCAACAAATTTCGATCACACCCTCCTCCGGAAAAGAGACTCAAATCCTCATCGACCGCGCGGATAACGCGATCCAGCTTGCCATGGCGAGGCTAGAGGACGAGTTGAAGCATGCCTTGATTAAGAACACGGTTCCACTTGACGCTGACAAGCTCTATGGGTCGATCAGAGGGGATAGTCTCTCGTTATCATCGAATTACGGGGGACTTGGCGAGAATTTTGAAAGCTTCGATGAGGTCAATGATTGCGATTCTGCGCGGTTTCATGAACGCGGCGCGAGCTTGGCCGACGATGTCTTCGTTGATTTGATAAATCCAGACGGGTTGGAAGAGCTGAAAGAGATTGCTGACCGAATGATCAAGTCTGGCTACGAACAGGAGTGCCGTCAGGTATATAGCAATACTCGTCGTGACGCCTTGGATGAGTGCTTGGCTATCCTGGGTGTTGAAAGATTGAGTATCGAAGAGGTTCAGAGGATTCCGTGGGACATGTTGGACGAGAAAATGAACAAATGGATATGCGCTGTTAAAATTTTTGTTAGGGTGATCTTCACCGGCGAGAAGAGGCTTTGTGATAGTATATTTGAAGAATACGGTGGCACCTGTTTCAAGGACACTGCAAAAGGGTGTATTATGCAGTTGCTGAATTTTGGTGAGGCCGTCGCAATTATTCGAAGAGCACCGGAGAAGTTGTTCAGGATATTAGATATGTACGAGGCTTTGAGGAACGTGCTTCCTGACCTGGAGGCTTTGATTTCAGATGATTTTGTGATGAGTGAGGCCGAAGGATTGCTAACTTTACTCGGTGAGGCAGCTAAAGGTTCGTTTGCTGAGTTTGAGAATGCTGTTCGTAATGAGACTTCCAAAAGGCCAGTCTTAACTGGGGGTCTCCATCCAATGCCACGTTATGTGATGAACTACATGAAGTTGCTGGTGGATTATGCTGACTCTCTGGACTCACTTTTAGAAGTAACTGAAGAGGATCTTGATCGATTTCAAAACAAACTTGGCGGTAACAGTTCTCAGTTGGAGAATATGTCCCCCTTACATCGGAGAATGCTGTTATCAATGTCAGAGCTTGAGATTAATCTTCAGGAAAAATCTAAAATCTATGAGGACGGTGCAATGCAGTATATATTTTTGATGAACAATATGCATTACATTGTGAAAAAAGTGAAAGACTCTGATCTTCGGAATGTCCTAGGAGATGACTGGGTTCGAAAGCGCCGTGGTCAGATACGCCAGTATGCTACAGCCTATCTCAGGGCCTCTTGGACCAAGGCATTGACCTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCCTCCAAGAATGCTTTGAAGGAAAGGTTCAAGAATTTCAATGCATGCTTTGAGGACATATATAGGATTCAGACTGCTTGGAAGGTGCCAGATGCTCAGCTTCGGGAAGAATTACGAATCTCTATATCAGAGAAGGTGCTTCCTGCATACCGCTCGTTTGTGGGAAGGTTTGGTGGTCAGCTAGAGGGAAGGCATGCTGGGAAGTACGTTAAGTATACTGCTGATGATCTAGAAAGCTTTTTATTGGACTTATTTGAAGGAGAGCCTAAAGTATTGCACCATGTGAGGAGAAAGAGTACATAG 1992 0.4669 MAATTTTTSSLGEGADDRLLATAQQIVRSLNTPKEVREDMLLIFSSFDNRLSSITDLINGDDSKSSTAEDDLDRFQAAEKVILHWDGSGSGVAPRQSNSLLHSRDDVVEYLSAVDDIIQWIQQISITPSSGKETQILIDRADNAIQLAMARLEDELKHALIKNTVPLDADKLYGSIRGDSLSLSSNYGGLGENFESFDEVNDCDSARFHERGASLADDVFVDLINPDGLEELKEIADRMIKSGYEQECRQVYSNTRRDALDECLAILGVERLSIEEVQRIPWDMLDEKMNKWICAVKIFVRVIFTGEKRLCDSIFEEYGGTCFKDTAKGCIMQLLNFGEAVAIIRRAPEKLFRILDMYEALRNVLPDLEALISDDFVMSEAEGLLTLLGEAAKGSFAEFENAVRNETSKRPVLTGGLHPMPRYVMNYMKLLVDYADSLDSLLEVTEEDLDRFQNKLGGNSSQLENMSPLHRRMLLSMSELEINLQEKSKIYEDGAMQYIFLMNNMHYIVKKVKDSDLRNVLGDDWVRKRRGQIRQYATAYLRASWTKALTCLKDEGIGGSSNNASKNALKERFKNFNACFEDIYRIQTAWKVPDAQLREELRISISEKVLPAYRSFVGRFGGQLEGRHAGKYVKYTADDLESFLLDLFEGEPKVLHHVRRKST 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0493 663 Coils Coil 435 455 - -
Acco13g0493 663 Gene3D Exocyst complex component Exo70 96 656 - -
Acco13g0493 663 FunFam Exocyst subunit Exo70 family protein 94 656 - -
Acco13g0493 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 650 IPR004140 GO:0000145|GO:0006887
Acco13g0493 663 SUPERFAMILY Cullin repeat-like 72 649 IPR016159 -
Acco13g0493 663 Pfam Exo70 exocyst complex subunit 291 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0493 Acco-ChrAcco13 3538887 3540878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0493 17 662 EXO70 exocyst subunit family AT5G50380 58.493 0.0 753