Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0489 ATGGCGTCTTTTCAAGCCTCACTGCAATCCAATCACATTCATCCCACGCAAATCCCCAGAAGTTTCCTCGCCCAAAAACCTGTCCTCAACCTCTCATTCCCCGGCACCAATTTCCCTTCTCTCAAAGTGAAATTCCCCGGCACCAACACTAACCGTCGATCCAATGGAGCCTCCGGAGCTACGATGGCGGCAACCGCCGCCGCTAGCTACGCCCTCGCCCTCGCCGACGTTGCCAAAGCCAGCAGTTCCCTCGATGCCACCACCTCCGACATCGAGAAGGTCGAGGAAGTCTTCTCCGATCCTCAGGTGTTCGACTTTTTCTCCAATCCGACTATTGATATCGAGAACAAGCGCAAGGTAGTGGATGAAATTGCGACCTCTTCGAGCTTGCAGCCCCACACTCGTAACTTCCTCTACATTCTTGTGGACGCCAAGAGGATTGATCTGATCAAGGACATTGCGAAGGAGTATGAGTTCGTCTACAACGAATTGACGAACACAGAGCTCGCGGTTGTGAGCTCGGTGGTGAAATTGGAGTCGGAGCAGTTGTCGCAGATAGCGAAGCAGGTGCAGAAGCTGACAGGGGCGAAAAATGTGAGAATTAAGACTGTGATTGATCCGAGTTTGGTGGCCGGATTCACCGTCAGGTATGGGAATTCTGGTTCTAAATTGATTGACATGAGCGTGAAGAAACAACTTGAGGATATTGCAGCTCAGCTTGATATGGGTGACATTACACTCACTGTATAA 750 0.5093 MASFQASLQSNHIHPTQIPRSFLAQKPVLNLSFPGTNFPSLKVKFPGTNTNRRSNGASGATMAATAAASYALALADVAKASSSLDATTSDIEKVEEVFSDPQVFDFFSNPTIDIENKRKVVDEIATSSSLQPHTRNFLYILVDAKRIDLIKDIAKEYEFVYNELTNTELAVVSSVVKLESEQLSQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEDIAAQLDMGDITLTV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0489 249 Hamap ATP synthase subunit delta [atpD]. 62 242 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 PRINTS ATP synthase delta subunit signature 66 85 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 PRINTS ATP synthase delta subunit signature 197 212 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 PRINTS ATP synthase delta subunit signature 146 160 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 PRINTS ATP synthase delta subunit signature 215 233 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 PRINTS ATP synthase delta subunit signature 135 146 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 Pfam ATP synthase delta (OSCP) subunit 67 240 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 199 218 IPR020781 GO:0015986|GO:0016020|GO:0046933
Acco13g0489 249 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 63 166 IPR026015 -
Acco13g0489 249 NCBIfam ATP synthase F1 subunit delta 67 240 IPR000711 GO:0015986|GO:0046933
Acco13g0489 249 Gene3D - 66 158 IPR026015 -
Acco13g0489 249 PANTHER ATP SYNTHASE DELTA CHAIN 51 241 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0489 Acco-ChrAcco13 3512104 3512853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0489 52 247 Primary Pumps ATPases AT4G09650 69.192 2.10e-97 283