Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0482 ATGGAGAACAACCAGCAAGCCCAGTCATCTTCGTACCCACCTCAAGCCCCTGCTCCTCCTCCTCCCTTTCACCACCTTCTCCAGCAGCAGCAGCAACAGCTTCAGATGTTCTGGTCTTACCAGCGCCAAGAAATCGAGCATGTCAACGATTTCAAGAACCACCAGCTTCCCCTCGCTCGAATCAAGAAGATCATGAAGGCCGACGAAGACGTCCGCATGATTTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGTGAGCTTTTCATCCTTGAGCTCACCATTCGATCTTGGCTTCACGCCGAGGAGAACAAGAGGAGGACTCTCCAGAAGAACGACATCGCCGCTGCCATCACCAGGACTGATATCTTTGATTTCTTGGTTGATATTGTGCCCAGAGATGAGATCAAGGACGAGGCTGGCCTTGGTGGCATTGTGGGCACCACCGCCAGCGGTGTCCCATACTATTATCCTCCCATGGGCCAACCTGCTGGCCCTCCTGGAGGCATGATTATTGGACGGCCGGCCGTGGATCCCACCGGAGTGTACGTGCAACCACCATCGCAGGCTTGGCAGTCGGTATGGCAGACAGCTGCTGAGGATGGATCATACGGTAGCGGTGGCAACGGTGGGCAGGGCAACCTTGATGGTCAGAGCTGA 660 0.5576 MENNQQAQSSSYPPQAPAPPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGIVGTTASGVPYYYPPMGQPAGPPGGMIIGRPAVDPTGVYVQPPSQAWQSVWQTAAEDGSYGSGGNGGQGNLDGQS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0482 219 MobiDBLite consensus disorder prediction 197 219 - -
Acco13g0482 219 Gene3D Histone, subunit A 23 133 IPR009072 GO:0046982
Acco13g0482 219 SUPERFAMILY Histone-fold 28 127 IPR009072 GO:0046982
Acco13g0482 219 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 20 151 - -
Acco13g0482 219 Pfam Core histone H2A/H2B/H3/H4 29 118 IPR007125 GO:0003677
Acco13g0482 219 FunFam Nuclear transcription factor Y subunit gamma 24 133 - -
Acco13g0482 219 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0482 Acco-ChrAcco13 3456470 3459163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0482 23 218 CCAAT-HAP5 Transcription Factor Family AT3G48590 87.624 2.59e-109 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Acco13g0482 CBFD_NFYB_HMF 2.2e-17 CL0012