Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0436 ATGCATTTCGCTAAACTTGATGATTCTCCGATGTTCCGGCAACAGCTGCAATGCTTGGAAGAAGGTGTCGATTCACTGCGGGGAAGATGCCTTAAGTTCTACAAAGGATGTCGAAAGTACACGGAAGGTCTTGGAGAGGGATATGATGGGGACATAGCTTTTGCGAGCGCCTTTGAAACTTTTGGGGGAGGGCATGGTGATCCTTTTTTTGTTGCTTTGGGAGGACCTGTTATGACCAAATTCACTATTGCTTTAAGAGAAATTGGTACCTACAAAGAAGTTCTACGGTCGCAGGTGGAGCACATGCTTAGTGACCGGTTGTTACACATTCTCAATGTTGACATCATTGATGTGAAGGAAGCTCGAAAGCGGTTTGACAAGGCTTCCCTTGTATATGATCAGGCACGCGATAAGTTTCTGACATTGAGAAAGAGCACTAGGATGGATGTTGCTACTGCCATCGAAGAGGAATGGCACAGTGCAAGAGATTCATTTGAGGAAGCCCGTTGCAATCTGGTTAGTGCTCTAAACAATGTTGAGGCCAAGAAGAGATTTGAATTTTTAGAGGCTGTCAGTGGAATTATGGATGCTCATCTTCGATACTTTCAACAGGGATACCAGCTATTGCATCAGATGGAACCTTTCATCACGGAGGTTCTGGCTTATGCACAGCAGTCAAGAGAAAGTTACAATACGGATCAGATCTCTTTAAATGAAAAATTGCAAAAGTACAAACGACAAATTCACCAAGAAAGTAGATTGTCTTTAAATGGTCCCCATGGTTCCCCTGGAGAATCTGTACAGCCTTTTCCTAGGATATCAAATGAAGTGGTAGACGCAGTCAAAGAATCTGCTGCAAATGGGAAGGTTCAAATCATTCGACAAGGATTTCTTTCAAAACGCTCTTCCAATCTGAGGGGTGACTGGAAGAGAAGATATTTTGTTCTTGATAGTCGAGGAATGCTGTTCTATTATCGCAAACCATGGAACTTGGCACATAGTAGCAATCCACCTTCTTTACAGAGAAATAATGCCAATGAAAATGGTCAAGGACTTTTGAGTCGGTGGCTTTCTTCTCATTATCATGGGGGAGTCCATGATGAGCGATCTGTCGCGCGCCATGCAGTGAACCTGCTTACATCAACAATTAAGGTTGATGCTGATCAGTCAGATTTAAGATTTTGCTTCCGGATTATTTCACCAGTAAAGAACTATACATTGCAGGCAGAAAATGCTGTGGACCAGATGGATTGGATTGAAAAAATGACCAGAGTAATTGCTTCCTTGTTGAGTGTTCAGTCAGTAGAAATGCCTCTCACAGCTGACTCTGAAAGTGGTGGATGTTCCTCTTCAAGCAAGAGTGATATGCTGGAAAACTTGCAAGACGATATTCAACCTATGAGTAAGGAGTGTGCATCCAAGAACATCACTTCAAATAATCATTTGCGTGAATATAAAAGTTTTCAGTTGCATAAAGAGAGCACAAGAGGTGAAATGCCAATTAATGTTCTTAGAAGGGTTAGTGGAAATGAGAGATGTGCTGATTGTGGTAAACCGGAACCAGACTGGGCATCCTTAAACCTTGGTATTCTCATATGCATCGAGTGTTCTGGCATTCATCGTAATCTTGGTGTACACATATCGAAGGTAAGATCACTGACACTTGATGTGAAAGTCTGGGACCCTTCGGTCCTAACCATGTTTCAGTCCCTGGGCAATCATTTTGCAAACTCAGTTTGGGAAGAGAAGTTGCATTCAGCAAGTAAAATGCAAGCTGTAGACATGACTGTTGAAAACAAATTACTTCGTGCGAGGAAACCACAACATGATGATTCTATTTCATTAAAAGAGAGGTTCATTCATGCAAAGTATTCTGAGAAAATCTTTGTCGATCAGATAAAGAATAACAACCTTCTCCTGTCAGTGGCACAACAGTTGTGGGAAAGTGTCTGTGCCAATGACAAGAAGTCAGCGTACCGGCATATTGTGAAGTCTGATTTGGATGTCAATGCTGTCTGTGGACAAGAATATTTTGATGATGCTTTTGACATGCCTTCTTCAAGCAATTCAAAATCTTCAGCTAAGAGTGAAAATCAGCCAATAGAGGACATACTTGATGGTTCAACTGTGCTTCACCTGGCATGCCTGACTGCTGACATTGCCATGGTGGAGCTGCTCTTACAATACGGTGCAGACATAAACGCTTCCGATTCAAGAGGTCGCACACCATTGCATTACTGTATTATTAGAGGGAAGAATGCAACTGCAAAATTGCTTCTGACGAGGGGGGCCAATCCACATGCCGCAGACGATGAAGGCAATACCCCTCTTAAACTTGCATCAGAATCCGCATCTATTAGCAATGACGTTCTCGCCCTCATTACAAGAAGATGA 2394 0.4248 MHFAKLDDSPMFRQQLQCLEEGVDSLRGRCLKFYKGCRKYTEGLGEGYDGDIAFASAFETFGGGHGDPFFVALGGPVMTKFTIALREIGTYKEVLRSQVEHMLSDRLLHILNVDIIDVKEARKRFDKASLVYDQARDKFLTLRKSTRMDVATAIEEEWHSARDSFEEARCNLVSALNNVEAKKRFEFLEAVSGIMDAHLRYFQQGYQLLHQMEPFITEVLAYAQQSRESYNTDQISLNEKLQKYKRQIHQESRLSLNGPHGSPGESVQPFPRISNEVVDAVKESAANGKVQIIRQGFLSKRSSNLRGDWKRRYFVLDSRGMLFYYRKPWNLAHSSNPPSLQRNNANENGQGLLSRWLSSHYHGGVHDERSVARHAVNLLTSTIKVDADQSDLRFCFRIISPVKNYTLQAENAVDQMDWIEKMTRVIASLLSVQSVEMPLTADSESGGCSSSSKSDMLENLQDDIQPMSKECASKNITSNNHLREYKSFQLHKESTRGEMPINVLRRVSGNERCADCGKPEPDWASLNLGILICIECSGIHRNLGVHISKVRSLTLDVKVWDPSVLTMFQSLGNHFANSVWEEKLHSASKMQAVDMTVENKLLRARKPQHDDSISLKERFIHAKYSEKIFVDQIKNNNLLLSVAQQLWESVCANDKKSAYRHIVKSDLDVNAVCGQEYFDDAFDMPSSSNSKSSAKSENQPIEDILDGSTVLHLACLTADIAMVELLLQYGADINASDSRGRTPLHYCIIRGKNATAKLLLTRGANPHAADDEGNTPLKLASESASISNDVLALITRR 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0436 797 CDD BAR_SFC_plant 15 215 IPR035670 -
Acco13g0436 797 ProSiteProfiles Ankyrin repeat region circular profile. 739 771 - -
Acco13g0436 797 SUPERFAMILY PH domain-like 292 450 - -
Acco13g0436 797 ProSiteProfiles Ankyrin repeat profile. 739 771 IPR002110 GO:0005515
Acco13g0436 797 SMART 5bar 2 218 IPR004148 GO:0005515|GO:0005737
Acco13g0436 797 SUPERFAMILY ArfGap/RecO-like zinc finger 501 631 IPR037278 -
Acco13g0436 797 ProSiteProfiles Ankyrin repeat profile. 706 738 IPR002110 GO:0005515
Acco13g0436 797 SMART ANK_2a 739 768 IPR002110 GO:0005515
Acco13g0436 797 SMART ANK_2a 706 735 IPR002110 GO:0005515
Acco13g0436 797 Pfam BAR domain of APPL family 6 232 IPR004148 GO:0005515|GO:0005737
Acco13g0436 797 PANTHER CENTAURIN/ARF 3 794 IPR045258 GO:0005096
Acco13g0436 797 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 480 638 - -
Acco13g0436 797 Gene3D - 644 796 IPR036770 -
Acco13g0436 797 ProSiteProfiles PH domain profile. 291 427 IPR001849 -
Acco13g0436 797 Gene3D Arf GTPase activating protein 478 638 IPR038508 -
Acco13g0436 797 PRINTS HIV Rev interacting protein signature 552 573 IPR001164 GO:0005096
Acco13g0436 797 PRINTS HIV Rev interacting protein signature 510 529 IPR001164 GO:0005096
Acco13g0436 797 PRINTS HIV Rev interacting protein signature 529 546 IPR001164 GO:0005096
Acco13g0436 797 Gene3D Arfaptin homology (AH) domain/BAR domain 4 251 IPR027267 -
Acco13g0436 797 ProSiteProfiles Ankyrin repeat region circular profile. 706 737 - -
Acco13g0436 797 SMART arf_gap_3 498 637 IPR001164 GO:0005096
Acco13g0436 797 CDD PH_ACAP 294 431 - -
Acco13g0436 797 Coils Coil 227 247 - -
Acco13g0436 797 SUPERFAMILY Ankyrin repeat 663 783 IPR036770 -
Acco13g0436 797 Pfam PH domain 293 426 IPR001849 -
Acco13g0436 797 SMART PH_update 292 429 IPR001849 -
Acco13g0436 797 CDD ArfGap 501 624 - -
Acco13g0436 797 Gene3D - 284 437 IPR011993 -
Acco13g0436 797 ProSiteProfiles ARF GTPase-activating proteins domain profile. 498 637 IPR001164 GO:0005096
Acco13g0436 797 Pfam Ankyrin repeats (3 copies) 711 794 IPR002110 GO:0005515
Acco13g0436 797 Coils Coil 118 138 - -
Acco13g0436 797 SUPERFAMILY BAR/IMD domain-like 6 314 IPR027267 -
Acco13g0436 797 Pfam Putative GTPase activating protein for Arf 502 631 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0436 Acco-ChrAcco13 3117567 3127228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0436 497 630 C2H2 Transcription Factor Family AT4G21160 40.741 2.52e-21 94.4