Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0435 ATGGGATCAACAGAGGTACCGATCAAGGGAAATCGCGTCGATGGGACGGAGGGCAGCCACTCCTCTGTTTACAACAACCATAACGATGCTTGGAAACCTGCAGAGTGTCAGAATGCTCACTCATCGTCAACTGTGAGAGACCCGGAAGAAGCGCTCTACCGGGAGCTTTGGCATGCTTGTGCTGGTCCCCTCGTTGCAGTGCCCCGTAAAGGGGAGCGGGTCTTCTATTTTCCTCAGGGACACATTGAGCAAGTGGAGGCGTCCACAAATCAAGTGGCGGACCAGCATATGCCTGTGTACGATCTCCCATCGAAAATCCTTTGTCGAGTGATCAACGTGTTGTTGAAGGCTGAGCCGGACACCGACGAGGTGTTTGCCCAGGTGACCTTGCTTCCGGAGTCAAATCAAGATGAAAACGCCGTTGAGAAAGAGGCTCTGCCTTCTCCACCGCCACGATTTCAGGTGCATTCGTTCTGTAAAACTCTGACGGCCTCTGATACAAGCACTCATGGTGGATTTTCAGTACTGAGACGTCATGCCGATGAATGCCTTCCTCCTCTGGATATGTCGAAGCAGCCACCTAACCAGGAGTTGGTGGCGAAGGATCTACTCGGTAACGAGTGGAGATTCAGGCATATCTTTAGAGGTCAACCACGCAGACATTTACTACAAAGCGGTTGGAGTGTTTTTGTCGGCTCTAAGAGGCTTGTTGCTGGTGATGCATTTATATTTTTGAGGGGTGAGAATGGGGAACTTCGTGTTGGAGTGAGACGTGCAATGAGACATCAGGGTAATGTTCCGTCCTCAGTGATCTCTTGTCACAGCATGCATCTTGGTGTCCTTGCAACTGCGTGGCATGCGGTTTCGACTGGAACCATGTTCACTGTGTATTACAAGCCCAGAACTAGTCCTGCCGAATTCATTGTTCCTTACGAACAATATATGGAGTCTCTTAAAAATAATTATACAATAGGAATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAGAGGTTTACTGGTACTGTTATTGGACTTGAAGATGCTGATCCACAAAGGTGGCCAAAATCCAAATGGAGATGTCTCAAGGTGAGATGGGATGAAACATCTAGCATTCCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATCGAACCTTCTCACGCTCCTCCAGTTCTAAATCCTCTTACACTGGCCAGGCCTAAAAGGCCTCGGCCTAATGCGATTCCATCATCACCTGATTCGTCTGTTCTCACTCGTGAAGTGTCATCTAAGGTAACTATTGACCCTTTGTCGGCAAGTGGATTTCCAAGGGTATTGCGAGGTCCAGAATTCTCAACCTTGAGAGGCAATTTGGCAGAAAGCTATGAATCTGATACTGCCGAAAAGCTTGATGAAAAAAATGCAGTGTCTACTTCAAGTACGTTTGCTCCGGAGAGCTGGACACCAACAGGGAGGCATGAGCCTTCATGTTCAGACTTGCTTTCAGGCTTTGGGATAAATGGAGATCGAAACCATCTATCCTTGGTAGATCAAACTAGCCCTATGCCTAGTCCTGGAAGGAAACATTTGTTAGGTCATGAAGGCAAGTTTAATGTGGTAGCCTGCCCAAGGCATGTAATGCCTTCTAGTCTATCATTGAATCTCTTGGACCCTAACATGAAAGGTTCACAAGACAGTGATGTAACTTACCATGGTAGGTGGAATGTGAGGTATGGCGCATTTGGTGATTACCTTGTGCTTCCTGCTCAGAAAGAAGAGCATAAGAGGCATGGAAGCCTGTTGATGCCACCGCCTCCACCCCCAACTCAACATGATAGCCCTGGATCAAGAGACCCGATGCAACAACCAACACAGGCAAGATCATGCGAGACTGTTAAAGCGAAAGAAGGGGACTGTAAGCTATTTGGCATCTCACTTATCAGTGGCCCAAGTACACCAGAGCCTTCCACATCAAAAATAAATATGGCATGTAAGCCAGCTGGTCACAAGCATCTTAAATCACAACAGCCTGATACCAATGAAAGTGATTTGAAATCAGAACAATCAAGCGGATCAAAGCTGCTGGATGCAGTAGTTGCTACCGATGACCATGAAAAGCCACCACAAGCATTTCAGCCACATATGAAAGGTGTTCAAGCCATACCACGCAGTGATTCTGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGGATCGCTCTTGGTAGGGGAATTAAGGTCTTTGAAAAAGGATTGGCTAATTGTCTATACTGA 2259 0.4732 MGSTEVPIKGNRVDGTEGSHSSVYNNHNDAWKPAECQNAHSSSTVRDPEEALYRELWHACAGPLVAVPRKGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVLLKAEPDTDEVFAQVTLLPESNQDENAVEKEALPSPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPNQELVAKDLLGNEWRFRHIFRGQPRRHLLQSGWSVFVGSKRLVAGDAFIFLRGENGELRVGVRRAMRHQGNVPSSVISCHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPYEQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTVIGLEDADPQRWPKSKWRCLKVRWDETSSIPRPERVSPWKIEPSHAPPVLNPLTLARPKRPRPNAIPSSPDSSVLTREVSSKVTIDPLSASGFPRVLRGPEFSTLRGNLAESYESDTAEKLDEKNAVSTSSTFAPESWTPTGRHEPSCSDLLSGFGINGDRNHLSLVDQTSPMPSPGRKHLLGHEGKFNVVACPRHVMPSSLSLNLLDPNMKGSQDSDVTYHGRWNVRYGAFGDYLVLPAQKEEHKRHGSLLMPPPPPPTQHDSPGSRDPMQQPTQARSCETVKAKEGDCKLFGISLISGPSTPEPSTSKINMACKPAGHKHLKSQQPDTNESDLKSEQSSGSKLLDAVVATDDHEKPPQAFQPHMKGVQAIPRSDSARSCTKVHKKGIALGRGIKVFEKGLANCLY 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0435 752 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 50 742 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco13g0435 752 MobiDBLite consensus disorder prediction 610 625 - -
Acco13g0435 752 MobiDBLite consensus disorder prediction 469 489 - -
Acco13g0435 752 FunFam Auxin response factor 321 393 - -
Acco13g0435 752 FunFam Auxin response factor 156 260 - -
Acco13g0435 752 SUPERFAMILY DNA-binding pseudobarrel domain 154 287 IPR015300 -
Acco13g0435 752 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Acco13g0435 752 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Acco13g0435 752 MobiDBLite consensus disorder prediction 383 423 - -
Acco13g0435 752 Gene3D - 155 260 IPR015300 -
Acco13g0435 752 MobiDBLite consensus disorder prediction 1 26 - -
Acco13g0435 752 SMART B3_2 158 260 IPR003340 GO:0003677
Acco13g0435 752 MobiDBLite consensus disorder prediction 462 489 - -
Acco13g0435 752 MobiDBLite consensus disorder prediction 664 688 - -
Acco13g0435 752 Pfam Auxin response factor 284 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco13g0435 752 Gene3D - 321 392 - -
Acco13g0435 752 CDD B3_DNA 156 258 IPR003340 GO:0003677
Acco13g0435 752 MobiDBLite consensus disorder prediction 588 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0435 Acco-ChrAcco13 3093395 3097304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0435 1 742 B3 DNA Binding Superfamily AT5G62000 59.067 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco13g0435 B3 6.5e-20 CL0405