Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0433 ATGAACTCCATCACCTTCTTGAAGAATCAAAGTGTTCTTTCCATAGCTACCATTGCTCCTTACCATCTCACTGTTGTGCCTTACATTGAACTTTTCAAAGGTGTTTCTGCAAAATCTTACCGATTCTTGCTCTCTCGGTCTCATTCGGCTGCTGTTCCTTGCAATATTCTCATCTCTCACGAACAAATCGACTCTGTTTGCAGCAAACGCCGAAAAGGGCACGAGCAGGGCACTGACGAAGAAGAGGATCCCAAGGCCACGTTACCTCTTGACGGTACCTCTCAGGTCCGCATCTTACTCAGCGCGGGAGAAGCAAAATGTGATACTCTTCGTGAGGAAACAACAGAAATCAATTTTTCAGAAAGGCTTGGTAAAGCTGCAATGCTGGATGTTGAATCAAGCTCCTTTTCATGGGATGGGCTATCTTCATTGCATAATGTTGAATACGGTAGCAGCAATGACCATTCTGAGGACGACATGAACAAACCTCTTGAGGTAACTGTACATTCTGGGGGAGTTGTTTTCTTTGCCTTTTTTCGTCGCTTTGGGAATGATGACAGTTTTCCAAAGGAGGAAGCAGCTGTTATAAAGATATCATCAACAGGAATGGCAACACAATCTGAACGGCTTGGTTATGAGTTTGCTAAGTGGTTGGGAGTCCGAACCCCACAGACCAGTCCTGAATGGCTCCAAATAAAGGGTGCAACAGAAAAGGCAAGGGATGCAGCTAATTCTAAAGGAGATGAAACTGGCAGCATGACATGTTCAGAACTCTTGGAAGCACTTGAGCTGAGCCGATGCCTCGTTTTTTATGGGGGCTCAGCATCTTCTTGCAGCTACGTGCATGGATCACCTTTACTTGAAAGTTCTTGTGCTTTCGAGTCCCAGGAATCTGTAGAAAGAACATCTGCATCTCTTGGCAGGGTGTTGATGCTAGACCTTGTTATCCGAAATGAAGATAGACTCCCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGACTGAAAAGATTATATCTGCTAATGTTGATACACTAGAGGAAGCTTTTGATTCTGCGATGAATCTGTATAGACCGAGGGTGATCAGCGTACTTCACAAAGAAATAAGGTCAACTTCACCGCATAGCAGATTGAGTTATCATAACCCTGGATTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAAGATTGTCTAACATAAGCTCTCAAAGCCACATATCAAGTGAAGAACTCTTTAGCGACATCAACATTGCGGCTATTGACTCCGGTGTTCCCCGCCGGCCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTGCTCAATAGTTCTGAGTTCGCCTCCAATCTCTTACATGATATAACTGGAGGTAAATTAGGATATCCTTTGCCAGAAGTCACAAATTCAACAACTGATGTTCATTCAAATGACATGTCATCAGCAGTTCGTGCATTCCGTTGTGGTTTTCGTGCTGCTCTTAGGGATCTGCAGGGATTCCATATCTTCCTATTAACACTTCACCAGAAGCTTGATAGCTTGTTAAGATCATTTCTGAACATTATAAGCAAATTTTCAATGGGGGAATTTGACAAAGAGGATTCACTAGCTTCAGCTGACACCACTGCACAGGCGGCTGGAGGTGGCAATTGTTCCTCTCCAACAAGTAGAGAGAGGTTTGTTAATGATAACCTTCCAGATTTTGATCCAGAATCACAGAAAACTTCTCAAAGGGCATCAGGTGCTGGCAGCAGAGATAGTCCTGAATTTTCTGCTGTGGCAAGAGAAGGCTGGCATGGGAAGTTCTGTAAAGGAAGCGGCGAAACACTTCGAAGTCTCCGCTTGACAGCAAAGCTCCGTGACTTCCATAAGTATGCAAAGGTCGATGCAGAGTCTAACAAAGAATTGGAACAGTGGAATGAAATGCTAAAAAGTGATGCCGTAAAGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGGAGTGATAATTACTGTGTCATTGATGCTTACGAATTGAAGGTAAGTGATGATGAAGATTCTAACATCAGTAGCATATTTGAAGAAGCTTGTGATCTGATACGTGATGTTGAAGGAACAGGTCAGAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACATTGGTGCTTGCTTACTTAATGCTCAGGAAGAAATACAACTTGCTTGAAGCATGGAATGCTATAAAACGGGTCCACCGGCGAGCACAGCCAAACGATGGTTTTGCAAGTATCTTAATGGAACTAGATCAGAAACTGCATGGGAAAGTCTCCATGGTGTGGCAGCATAGGAAACCGATGATGAAAACTTGCCCTATCTGTGGAAAGAATGTAGGACTAAGCAGCAGCTCTCTTAAGCTGCATCTGCAGAAATCGCATAGAAGACTATCATCAGGGAGTGTAGATAGTGGCATTAAAATGGAGATTGAGAAAGCTTTAGCTGCTTTGAAGATTAGTCGCGGGAGAAAGCGTCAACATATGGGCCCTCGTGTATTTATAATTGAAGATAATAAAATTTGA 2595 0.4328 MNSITFLKNQSVLSIATIAPYHLTVVPYIELFKGVSAKSYRFLLSRSHSAAVPCNILISHEQIDSVCSKRRKGHEQGTDEEEDPKATLPLDGTSQVRILLSAGEAKCDTLREETTEINFSERLGKAAMLDVESSSFSWDGLSSLHNVEYGSSNDHSEDDMNKPLEVTVHSGGVVFFAFFRRFGNDDSFPKEEAAVIKISSTGMATQSERLGYEFAKWLGVRTPQTSPEWLQIKGATEKARDAANSKGDETGSMTCSELLEALELSRCLVFYGGSASSCSYVHGSPLLESSCAFESQESVERTSASLGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKIISANVDTLEEAFDSAMNLYRPRVISVLHKEIRSTSPHSRLSYHNPGLVSQVSDISEMAESPRLSNISSQSHISSEELFSDINIAAIDSGVPRRPPAGKRAIDQAIYPKLVELVLNSSEFASNLLHDITGGKLGYPLPEVTNSTTDVHSNDMSSAVRAFRCGFRAALRDLQGFHIFLLTLHQKLDSLLRSFLNIISKFSMGEFDKEDSLASADTTAQAAGGGNCSSPTSRERFVNDNLPDFDPESQKTSQRASGAGSRDSPEFSAVAREGWHGKFCKGSGETLRSLRLTAKLRDFHKYAKVDAESNKELEQWNEMLKSDAVKLCQENNFNTGFFEGSDNYCVIDAYELKVSDDEDSNISSIFEEACDLIRDVEGTGQRILVHCFEGKSRSVTLVLAYLMLRKKYNLLEAWNAIKRVHRRAQPNDGFASILMELDQKLHGKVSMVWQHRKPMMKTCPICGKNVGLSSSSLKLHLQKSHRRLSSGSVDSGIKMEIEKALAALKISRGRKRQHMGPRVFIIEDNKI 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0433 864 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 75 691 IPR035010 GO:0004721|GO:0009737|GO:0043622
Acco13g0433 864 MobiDBLite consensus disorder prediction 69 88 - -
Acco13g0433 864 Gene3D - 286 421 IPR036940 -
Acco13g0433 864 SMART dsp_5 652 777 IPR020422 GO:0006470|GO:0008138
Acco13g0433 864 ProSiteProfiles Dual specificity protein phosphatase domain profile. 628 780 IPR020422 GO:0006470|GO:0008138
Acco13g0433 864 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 704 756 IPR000387 GO:0016311|GO:0016791
Acco13g0433 864 MobiDBLite consensus disorder prediction 555 574 - -
Acco13g0433 864 MobiDBLite consensus disorder prediction 69 87 - -
Acco13g0433 864 Pfam Actin-fragmin kinase, catalytic 116 432 IPR015275 -
Acco13g0433 864 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 684 780 IPR029021 -
Acco13g0433 864 MobiDBLite consensus disorder prediction 582 598 - -
Acco13g0433 864 Pfam Dual specificity phosphatase, catalytic domain 685 776 IPR000340 GO:0008138|GO:0016311
Acco13g0433 864 CDD DSP 674 773 - -
Acco13g0433 864 Gene3D Protein tyrosine phosphatase superfamily 637 798 IPR029021 -
Acco13g0433 864 MobiDBLite consensus disorder prediction 555 602 - -
Acco13g0433 864 SUPERFAMILY Protein kinase-like (PK-like) 115 446 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0433 Acco-ChrAcco13 3072298 3082524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0433 689 847 Protein tyrosine phosphatase (PTP) family AT5G23720 71.698 1.44e-62 226