Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0424 ATGAAAACAACCGACACCTCCGATCCCATCACTCTCTCCGATCAGCTTCTTTCCTCTCTTCTCGGCGAAATCCCCACCATTCCTCATTTCAAAGGTAAGTGGTCTCTCGTCACTTCAAAACTTCACCTCCTTCACTCTCGACTTGCCGATTTCTCCCACTTTCCTCATTCCTCGTCCTCCAACTCTCTCTCCAGAGACCTTCTTCTCTCCTTGACTAAGACGCTCAGGGACGCCGTTTCCCTCGTCAAGGATTGCCAGTTCCCCACCTTATACCACGGCAAGCTCAAGACCCAGAGCCTCATTGACTCACTCCTTGCCACCCTCGACCGTTATCTCTCAGACTCCGATGTTCTTCTCAAAAGCGGCGTTCTCCAGGATGACACCGTTTCAACTACGTCTAACAGGGACGGTGTTCGATCTGAATCTAGGAATTTGACCGCTCGTCTGCAAATTGGGTCCTCTGAGTCTAGGATTTTAGCTATGGACTCCTTTCTGGGTTTACTGCAAGAGAATGATAAGAATGTGATGATAGCTGTAGCACAGGGTGTGGTTCCCGTGCTCGTTCGCTTACTAGATTCGAGCTCTTCGGAGATGAAGGAGAAGATCGTCGCTGCGATATCCAGAGTTTCAACGGTAGATACCAGCAAGCATGCGTTAATTGCCGAAGGTTTGGTGCTTTTGAATCACCTGCTTCGAGTTCTTGACCATGGAAGTGGGTTTGCGAAAGAGAAAGCCTGTATTGCCCTCCAAGCTCTGACGTTCTCTAAGGAGAACGCGAGAGCAATCGGGTCTAGAGGTGGGATTTCTTCTCTACTGGACATTTGCCAAGTAGGCACGCCTGCTTCCCAAGCTTCCGCGGCTAGCGTTCTGAGAAATCTTGCGGTTTTCCCTGAAGTCAGAGAAAATTTCGTCGAGGAAAATGCGGTTGTTGTTCTGTTAGGGCTCGCTTCATCGGGTACGGCAATAGCCCAAGAAAATTCAATTGGTTGTTTGTCTAATCTAATTTCTGACGACGAAAGCTTGAAATTAATGAGTGTTAAGGAAGGAGGGATTGAGTGTTTGAAGAATTTCTGGGACTCCGTTCCGTCTGTTCATAGTCTCGAAGTAGCAATTGAGTTATTCATTAGCCTGGCTTCGAGTCCACCGATTTCTGAAGTTCTTATTTCAGATGGGTTCATTCCGAGACTTGCGGGCGTGTTACGTTGTGGTGTTCTAAGGATGAGAATTGCGGCTGCTCGAGCTGTTTATGCTCTCGGGTCCAGCACCACAAAGGCGAAGAAAGAGATGGGGGAATTCGGATGCATTACTCCATTGATACAGATGTTAGATGGCAAAGCTGTTGAAGAGAAAGAAGCAGCTGCAATGGCTTTATCAACACTCATGTTATATGCAGGCAATAGAAGGATTTTCCGAAAGGATGAGAAGGGTATAGTTAGTGCAGTTCAGCTTTTGGATCCTTCAATACAGAATTTGGATAAGAAATACCCAGTTTCTATTCTGGTCCCACTTATGCATTCTAAGACTTGTAGGAAACAAATTGTAGCAGCTGGTGCTGGTGTACATACACGAAAACTTGTAGAGATGAATGTTGAGGGATCTAAGAAACTCTTGGATAGCCTTGATCGTGCGAAGATATGGAAAGCTTTTGCAAGATCCTTAGGATGA 1665 0.4655 MKTTDTSDPITLSDQLLSSLLGEIPTIPHFKGKWSLVTSKLHLLHSRLADFSHFPHSSSSNSLSRDLLLSLTKTLRDAVSLVKDCQFPTLYHGKLKTQSLIDSLLATLDRYLSDSDVLLKSGVLQDDTVSTTSNRDGVRSESRNLTARLQIGSSESRILAMDSFLGLLQENDKNVMIAVAQGVVPVLVRLLDSSSSEMKEKIVAAISRVSTVDTSKHALIAEGLVLLNHLLRVLDHGSGFAKEKACIALQALTFSKENARAIGSRGGISSLLDICQVGTPASQASAASVLRNLAVFPEVRENFVEENAVVVLLGLASSGTAIAQENSIGCLSNLISDDESLKLMSVKEGGIECLKNFWDSVPSVHSLEVAIELFISLASSPPISEVLISDGFIPRLAGVLRCGVLRMRIAAARAVYALGSSTTKAKKEMGEFGCITPLIQMLDGKAVEEKEAAAMALSTLMLYAGNRRIFRKDEKGIVSAVQLLDPSIQNLDKKYPVSILVPLMHSKTCRKQIVAAGAGVHTRKLVEMNVEGSKKLLDSLDRAKIWKAFARSLG 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0424 554 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 182 224 IPR000225 GO:0005515
Acco13g0424 554 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 549 - -
Acco13g0424 554 Pfam Armadillo/beta-catenin-like repeat 171 208 IPR000225 GO:0005515
Acco13g0424 554 Gene3D - 360 537 IPR011989 -
Acco13g0424 554 SUPERFAMILY ARM repeat 145 490 IPR016024 -
Acco13g0424 554 Gene3D - 133 359 IPR011989 -
Acco13g0424 554 SMART arm_5 380 420 IPR000225 GO:0005515
Acco13g0424 554 SMART arm_5 296 336 IPR000225 GO:0005515
Acco13g0424 554 SMART arm_5 422 462 IPR000225 GO:0005515
Acco13g0424 554 SMART arm_5 255 295 IPR000225 GO:0005515
Acco13g0424 554 SMART arm_5 171 211 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0424 Acco-ChrAcco13 3002910 3004574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0424 138 411 U-box Gene Family AT2G23140 27.636 2.03e-16 80.5