Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0423 ATGAAAGAAGCACACGATATTTCCTCGAAGAATGTATTGAACAAATTTGCAAGAGAGAACGACAAGATGATGAGTGGTGGGATTGGAAAATTGAGGAGAATGCCGAGTGATGACGAAGATGATGTGTACCGACCCGTCATGGACTTAGAAGAAGGCTCCGGTGATAGTGAGGAAGAGCTTCCAGGGGCAACTACTGGAGCTCTACAAATTTCTCTTATGGAGGAAGAGATGACAAATAATGTACAAATCGCTGCGTTGGTGGCTCAACATATGACATCATATGTTTGTAAAGAGTCGTGTAGAACTAGTAACCAAACAGGAGCAAAATGGGTGCAGGAGGTTTTGCAAGGCCATGACAGGGTATGTCATGAAAATTTCCGAGTTGAAAAACATGTCTTCTATCATTTATGCTCTAAACTGGTAGACCATGGGTTACAGCACACGAGGTACACAAGAGTAGAAGAAATGGTAGCAATGTTCTTATATACTGTTGGTCATGGTTTAGGAAATAGAATAATACAGGAGCGGTTTCAACATTCAGGAGAAACTGTCAGTAGGTTATTCCACATGGTTTTAAATGCCTGTCTCAACCTAGTAGAGGAAAACATCAAACCACTTGATCCTGAGTTTCACGGTTGTCACCCACATATATTAAATGATCGCCGCTACTACCCATATTTCAAGAATGCAATAGGAGCGATTGATGGAACTCACATCAGTTGTGTGGTGGGCGAAGATGAGCATGACAGATATGTCGGAAGAAAGGGTGTTCCTACACAGAATATTATGGCAGTATGTGATTGGGATATGTGTTTTACTTATGTGTTGGCAGGCTGGGAGGGTACAGCACATGATGCACGTTTGTTCAACAGAGCAATCACTACTCCAGCTTTGCATTTTCCTCATCCACCTCAAGGGAAATATTACTTGGTCGATGCTGGCTATCCAACACCAGTTGGATATATTGGTCCGTATAGACGTGAACGTTATCACCTTCCACAATTCAGGCGACAACCGGGATTTCGAAATCCTAATGAGTGCTTCAATTATTATCATTCAAGTTTGAGGTGCACTATAGAGAGGACATTTGGAGTCTGGAAGAATAGGTTTAATATATTGCGAAATATGCCCTCTTATAGCTTTGAAACTCAAACCTACATAGTTTGTGCGACAATGGCTATACACAATCTCATCCGGAGATTTTCGAGTTCTGATGTGGAATTTCAACAAGCTGACCAAGGAGATTTGGGTGATGAAGATGAAGATGATGATGATCCACTTGATGAGGGCGCCTCATCAAATATCAACACATTATCGGCACCACAAATGAATCATCTTCGTGATAGGATCAGAGAGAAACTTGTCAGGGATAGCATTATGGAATGTAATCTGCAAAATCTTTTTCCTTCTCCTTCTTCTCACTCTCGAGTTAGAGAATTGAGCCTTCCCTTTTCGGATTCGGATCTTGCTGCGCTGCCTAGCTCCTACGCTGCGACTAGTGACTTACCTCTTATGCACGAGTTTGCAAATTGCAAAAATTTAGAGCTCCGCATGTTATATGGTTTGCTAGGGCTATACTGACTGCTTGCACCAACTTCTACATCTGTAACTAAATCCCCTGGATGCAAGATGGATGATGGCCACCAGCGTGAAAATGGCAGACAGAAAGTGGACTACTATAGAGGAGCTCATTCCCTGTGGAGTATGGTCCCCCAGCATCAGGTAAAGGAACCGAATGCTCTGGTCATGAATAAGAAAATTATGTCTGTTATTGCTGAGAGAGAAGCTGCAATTCGAGAACGGAATGCGGCTTTATCCGAAAAGAATGAAGCCCTAGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCGCTTCTGCAGAGGGATAATGCCTTGATGGAACGGGATAATGCTCTTGCAGCCATTCAAATCCAGGATAATGCCACCAACTTCTCATTGGGTTGTGGCACTCATCGTGGATCAAAGCGGATGCATCATTCCTCAAATCATTTTGGTCAAATGGCAGAAGGTGCTTATAGAACAAAGGATTTGACCACAACTGATGCCTTCCCGGTAACTATTGTAGCTTCTGAAGTGGGCAAGTATAATCAGGCCAAGAGAACAAGGGAGAACAAGGTAGATTTTTCTAAGGCATCAAAGCCACTAGGCAAAGGGAAAAAAGTGAGTGAGGACTTAAATAGGCAAGCTTCTTCTGAAGTGACAAAGATCAAATCTGAGTGGGACAAACAAGATGTTGGATTAAATTTGATTCAATTTGATGAAAATATCATGCCAGCCCCAGTTTGCACATGTACTGGAGTACCAAGGCAATGTTACAAATGGGGGAATGGTGGGTGGCAATCGTCTTGTTGTACCACCACCTTGTCCATGTATCCATTACCGCAGCTTCCAAACAAGCGACATGCACGAGTCGGAGGGCGAAAGATGAGTGGAAGTGTCTTCACAAGACTTCTTAGCAGGGTAGCCTCTCAAGGCCGTGATTTATACATACCATTAGATCTCAAGGACTACTGGGCTAGACATGGAACAAATCGCTACATCACGATCAAGTAA 2577 0.4323 MKEAHDISSKNVLNKFARENDKMMSGGIGKLRRMPSDDEDDVYRPVMDLEEGSGDSEEELPGATTGALQISLMEEEMTNNVQIAALVAQHMTSYVCKESCRTSNQTGAKWVQEVLQGHDRVCHENFRVEKHVFYHLCSKLVDHGLQHTRYTRVEEMVAMFLYTVGHGLGNRIIQERFQHSGETVSRLFHMVLNACLNLVEENIKPLDPEFHGCHPHILNDRRYYPYFKNAIGAIDGTHISCVVGEDEHDRYVGRKGVPTQNIMAVCDWDMCFTYVLAGWEGTAHDARLFNRAITTPALHFPHPPQGKYYLVDAGYPTPVGYIGPYRRERYHLPQFRRQPGFRNPNECFNYYHSSLRCTIERTFGVWKNRFNILRNMPSYSFETQTYIVCATMAIHNLIRRFSSSDVEFQQADQGDLGDEDEDDDDPLDEGASSNINTLSAPQMNHLRDRIREKLVRDSIMECNLQNLFPSPSSHSRVRELSLPFSDSDLAALPSSYAATSDLPLMHEFANCKNLELRMLYGLLGLYXLLAPTSTSVTKSPGCKMDDGHQRENGRQKVDYYRGAHSLWSMVPQHQVKEPNALVMNKKIMSVIAEREAAIRERNAALSEKNEALAARDEALRQRDEALLQRDNALMERDNALAAIQIQDNATNFSLGCGTHRGSKRMHHSSNHFGQMAEGAYRTKDLTTTDAFPVTIVASEVGKYNQAKRTRENKVDFSKASKPLGKGKKVSEDLNRQASSEVTKIKSEWDKQDVGLNLIQFDENIMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVASQGRDLYIPLDLKDYWARHGTNRYITIK 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0423 858 MobiDBLite consensus disorder prediction 26 65 - -
Acco13g0423 858 MobiDBLite consensus disorder prediction 412 429 - -
Acco13g0423 858 Coils Coil 602 635 - -
Acco13g0423 858 Pfam GAGA binding protein-like family 544 858 IPR010409 -
Acco13g0423 858 MobiDBLite consensus disorder prediction 409 438 - -
Acco13g0423 858 SMART GAGA_bind_2 544 858 IPR010409 -
Acco13g0423 858 MobiDBLite consensus disorder prediction 32 51 - -
Acco13g0423 858 PANTHER - 544 858 IPR010409 -
Acco13g0423 858 Pfam DDE superfamily endonuclease 234 396 IPR027806 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0423 Acco-ChrAcco13 2990243 2995582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0423 544 858 BBR or BPC Transcription factor family AT2G21240 57.098 1.21e-120 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Acco13g0423 GAGA_bind 1.8e-96 No_clan