Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0417 ATGGAAAAGATGAATTTTATGAAGAATGGAATTTGCAGATCATTGCCCCCTGGATTTAGGTTCCAGCCAACTGATGAAGAGCTTGTGTTTCAGTACTTGAAATGCAAGGTTCTTTCGTATCCATTGCCTACTTCGATCATCCCTGAAGTCAATGTCTGCGACTACGATCCTTGGGACTTGCCAGGTAATTGTGAAGAGCAAGAGAGGTATTTCTTCAGTTACAAGGAAGCGAAATACAGAAATGGCGATCGAATGAACCGAATGACCAAGTCTGGGTATTGGAAGGCAACTGGTTCAGACAAGAAGATATCATCTCCAACAAATAATAACAATGACTATTATAGATTTTCTGGGGTGAGAAAAACCCTAGTTTTTCACCAAGGGAAGGCTCCTAACGGCACTAGAACTAACTGGGTCATGCACGAATATCGCCTTGTCATTGCAGAAACCAGTGCTCCCAACCCAACTCGCCTGAGTCAAGGGAAGGAGGTAGGAGATTGGGTTGTGTGTGGGATAAGCATGAAGACGACAAGAGAAGGTGGTCATGTGTTGGCGAGAATGAAGAGAAGGTCAGAGACAGATGTTGTTAATGTGGGAGAGACAAGATTCTTTGATTTTATGAGGGTTGCTGCTGAACTCCATTATTCTGACACATCATCGTCTTGTTCCAGCTCAAGTGACATTACAGAGATGTTTTCAGGCGTGGCAGATCATGAAGAAACCAGTGGCCATCCATAG 738 0.4377 MEKMNFMKNGICRSLPPGFRFQPTDEELVFQYLKCKVLSYPLPTSIIPEVNVCDYDPWDLPGNCEEQERYFFSYKEAKYRNGDRMNRMTKSGYWKATGSDKKISSPTNNNNDYYRFSGVRKTLVFHQGKAPNGTRTNWVMHEYRLVIAETSAPNPTRLSQGKEVGDWVVCGISMKTTREGGHVLARMKRRSETDVVNVGETRFFDFMRVAAELHYSDTSSSCSSSSDITEMFSGVADHEETSGHP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0417 245 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 194 - -
Acco13g0417 245 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Acco13g0417 245 SUPERFAMILY NAC domain 10 175 IPR036093 GO:0003677|GO:0006355
Acco13g0417 245 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Acco13g0417 245 Pfam No apical meristem (NAM) protein 16 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0417 Acco-ChrAcco13 2941573 2942760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0417 1 208 NAC Transcription Factor Family AT5G13180 47.556 4.48e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco13g0417 NAM 1.3e-33 No_clan