Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0393 ATGTCAGTGAACTGTAAAACATATTGGTGTGAAAACAATGGTGTTGAGCTACCAAAAAAGCAAGGGAGCTGTAAAACAAAGAAATTTGGAAGCAGTCTTTCGGATTGTGATAGAGCTGCTATTAATGCTTCATTGGATAGGCTAGCAAATGGCGATATGGAACAGCAAAGAGCTGCAGCTGGGGAGCTCCGATTTATAGCCTCCGTGCTTCAACCTTCAAGTTTGGATTTTGGAAGAGACAGCGGCATGGGCACCCGCCATGAACCTGAAGACGAGGCTCTTCTCAACCGCGAATATGAGCTCCGTCTTATTCGCTGTACTCTCTCCTCTTCAGCCTCCATGTCCTCGCCTCAGTCTTCACCGTCCGAACAAGCTCACAATCTCAATGTTCTCATAAACCATCTGCTCGCTTTGATCGAGAGCGGGAACTACTTACAAGTCTTGAACTCCGAAGCTTCTAGGCTCGTCTTCCAACTTGGTGCTGACTCGCCTTTTTCCCTCGATGACTCAGTCGATTGCGCCGACCGAATCTACTCGGAATTGCTGAAGCGTGCTGAGTCGTTTATTGAAGTTAACTCAGCAAACGGTGCGGCAAAGGCTTCTAGGATAATGCTTGTGATCTGCATCGCGGTGGCTGCACTTCTTGGGTTCTCACAATGTAGCATTACTGGGCCGTTGAATGGACTACCAAGATGCCCCCTGCCACTGGAATTTGGGAAAGGCGATGAGTATCAAGAGTGGGACAGTTGGGCACGCAATCAGCTTATGTCTGCTGGGTCTGATTTGCTCGGGAAGTTCTCTAATCTTCAGTACATAGTTTTTGCTAAAATGTTGCTTATGAGGATGAAAGATTTATCATCTGGAGGAATTATCTCTCCCATGATTGGGTTTAAAAGCCTCTCTTGGTGGCTGGCAAGGGTTTTTCTTCTTCAACAGAGAATTTTAGATGAGCGATCTTCTTCTTTGTTTGATCTTTTGCAAGTCTATATGAGCGAAGCTTTACGGCAATTTGGCAATTCAGAAGCAGTTACGAGTTATTGGGATGCTAATTTACGTGCTGGAGAAAGCTCTGCAATTGTCTCCATGGTTCATATTGAGGCTGGAATTCTGGAACATGTGTATGGGCGAGTAGATTCTTGCAGGCAACATTTTGAGTCTGCAGAGATGGCAGCTGGGCTTCAGCTTTCAGTTACTGGGGTTCTTGGTTTCCGTACTGTACATCAGGTGGAACCAAAAGCACAAATGGTCCTTGTCACAAACTCGAGTCAATCTAACATTGGCAACTGCTCCTCAATGAATAATGGTATCCAGACACATGATTCCAGTCCTGGTGAAGCTAACCTGTCTTTGCAGCAGAATGATACCCATGAAGTATCTGACGTGCTTGTTGTTCCAAAGCTGTTGACAAATGATAAATCTGGAAGTGGGTTAGAAAAAATCAAGAACAGTGCTAATGGAACTGTCCATTTGACAGAAATAAAACAGGCAGTAGTTCTGGCCTACTGCCTTTTACTTGAGAAGAGCTCGCGACACGATGAGATGCAGAGATGGGATATGGCTCCTTACATCGAGGCAATTGATTCCCAGTATTTGTCACCTTTCACTATACAATGTTTCTGTGACGTCTTGCGGATACGATGGGAGTCATCACGCAGTCGAACAAAGGAGCGTGCTTTACTGATGATGGATAAATTGGTCCAGAGTCTGTATGAAGCTTCTCCAGCAATAACGGAAAGAATTCCTTTTTGCTATGGTGTTTATATGCCCTCCATTCCTGCCTTAAGGAAGGAGTATGGTGAGCTTCTGGTACGCTGTGGGTTAATAGGGGAGGCAGTTAAAGTTTTTGAAGATTTAGACTTATGGGATAATCTTATACTCTGCTATCGCCTGTTGGAGAAGAAAGCAACTGCTGTTGAACTCATAAAAAAATGTCTTTCCGAAAGACCCAATGATCCTAGGTTATGGTGTTCCTTGGGTGATGCTACTGATAATGATGCATGTTATGAAAAAGCTCTTGAAGTTTCAAACAATAGATCTGCAAGAGCTAAGCGCTCTTTGGCTCGTAGTGCATACAATAGAGGAGAATATGAAACGTCCAAGATTTTGTGGGAGTCTGCAATGTCCATGAACTCTTTGTATCCTGATGGTTGGTTTGCACTTGGGGCCGCTGCATTGAAGGCTAGGGATATTGAGAAGGCTCTGGATGGGTTTACCCGTGCAGTTCAACTTGATCCTGAAAATGGGGAAGCTTGGAATAACATTGCTTGCCTGCATATGATCAAGAAAAGGAGTAAAGAATCCTTCATTGCCTTTAAAGAAGCCCTGAAGTTCAAACGAGATAGCTGGCAACTCTGGGAGAACTACAGCCATGTAGCTGTTGATGTTGGTAATATCAGTCAGGCTTTGGAAGGTGCACAAATGGTTTTGGACATTAGCAATAACAAAAGAGTGGATGCAGAATTAATGGAGAGGATTATGAGAGAGGTGGAAAGAAGGGTTTCAATGAGTCAGTCCATGTCTCCTGTGACACCTAATAATGAGCATAGAGGACATAGAGATGACTCTGAATCAGAGATTTATGACCAAGGATCTGATGTATCTTCTGAAGGAAGATCACGAGAAACTGAGCAATTAGTGTTGTTACTTGGAAAAGTTTTACAGCAGATAGTTAAAAGTGGGAGTGGACCAGCAGCTGAAATCTGGGGCTTATATGCTCGTTGGCACAGAATTAAAGGAGATCTGTTAATGTGTTCTGAAGCGCTCTTAAAGCAAGTCAGATCACTCCAGGGATCTGACACATGGAAAGACAGAAATCGTTTTGAGAAGTTAGCTATTGCATCTTTGGAACTCTGCAAGTTGTACATGGAAATCTCCTCATCTACAAACAGCCGTAAGGAATTGTTTACGGCTGAGATGCACCTAAAGAACATCATCAAACAGGCACAGAGCTTCTCTGATACAGAAGAGTTCAGGGATCTTCAGGCTTGCTACGACGAAGTGAAAATCAAACTCCAATCATTCAATGCCTAA 3030 0.438 MSVNCKTYWCENNGVELPKKQGSCKTKKFGSSLSDCDRAAINASLDRLANGDMEQQRAAAGELRFIASVLQPSSLDFGRDSGMGTRHEPEDEALLNREYELRLIRCTLSSSASMSSPQSSPSEQAHNLNVLINHLLALIESGNYLQVLNSEASRLVFQLGADSPFSLDDSVDCADRIYSELLKRAESFIEVNSANGAAKASRIMLVICIAVAALLGFSQCSITGPLNGLPRCPLPLEFGKGDEYQEWDSWARNQLMSAGSDLLGKFSNLQYIVFAKMLLMRMKDLSSGGIISPMIGFKSLSWWLARVFLLQQRILDERSSSLFDLLQVYMSEALRQFGNSEAVTSYWDANLRAGESSAIVSMVHIEAGILEHVYGRVDSCRQHFESAEMAAGLQLSVTGVLGFRTVHQVEPKAQMVLVTNSSQSNIGNCSSMNNGIQTHDSSPGEANLSLQQNDTHEVSDVLVVPKLLTNDKSGSGLEKIKNSANGTVHLTEIKQAVVLAYCLLLEKSSRHDEMQRWDMAPYIEAIDSQYLSPFTIQCFCDVLRIRWESSRSRTKERALLMMDKLVQSLYEASPAITERIPFCYGVYMPSIPALRKEYGELLVRCGLIGEAVKVFEDLDLWDNLILCYRLLEKKATAVELIKKCLSERPNDPRLWCSLGDATDNDACYEKALEVSNNRSARAKRSLARSAYNRGEYETSKILWESAMSMNSLYPDGWFALGAAALKARDIEKALDGFTRAVQLDPENGEAWNNIACLHMIKKRSKESFIAFKEALKFKRDSWQLWENYSHVAVDVGNISQALEGAQMVLDISNNKRVDAELMERIMREVERRVSMSQSMSPVTPNNEHRGHRDDSESEIYDQGSDVSSEGRSRETEQLVLLLGKVLQQIVKSGSGPAAEIWGLYARWHRIKGDLLMCSEALLKQVRSLQGSDTWKDRNRFEKLAIASLELCKLYMEISSSTNSRKELFTAEMHLKNIIKQAQSFSDTEEFRDLQACYDEVKIKLQSFNA 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0393 1009 Pfam Tetratricopeptide repeat 714 747 IPR013105 -
Acco13g0393 1009 ProSiteProfiles TPR repeat region circular profile. 714 747 - -
Acco13g0393 1009 Gene3D Tetratricopeptide repeat domain 549 831 IPR011990 GO:0005515
Acco13g0393 1009 Pfam Tetratricopeptide repeat 749 780 IPR019734 GO:0005515
Acco13g0393 1009 PANTHER UNCHARACTERIZED 92 1004 IPR044244 -
Acco13g0393 1009 SUPERFAMILY TPR-like 596 812 IPR011990 GO:0005515
Acco13g0393 1009 MobiDBLite consensus disorder prediction 833 872 - -
Acco13g0393 1009 ProSiteProfiles TPR repeat profile. 714 747 IPR019734 GO:0005515
Acco13g0393 1009 SMART tpr_5 680 713 IPR019734 GO:0005515
Acco13g0393 1009 SMART tpr_5 618 651 IPR019734 GO:0005515
Acco13g0393 1009 SMART tpr_5 748 781 IPR019734 GO:0005515
Acco13g0393 1009 SMART tpr_5 714 747 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0393 Acco-ChrAcco13 2802065 2810896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0393 9 67 U-box Gene Family AT3G54850 65.000 1.63e-17 85.5