LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco13g0392	ATGGATGATTGTTGTCATCAAGTTACGGGCATTGGCCATCATGAGGAAAATGGAAAAAAACTTTTACTTGACATTCCAAAAGATTTGAAAGATGTTGAAAAAACTATTAAGACTGAAACTTTGTTTATGCCGGTATTTAAGAAAAGAAAGCGACTTAGCCGTAATCAGCTTATAGAGATGAAAGCAGGGTTAGGTGGGAAGCAGACACAACCTAGCAGCAAGCCTAAGACAAAGAAGCATGAGAGTACAGACAGATGGTCATCTGAGAGGTATCAGCTTGCTGAGCAAAGCATGTGGGAGGTCTTGAAGGCTAAAGGTGCAACTTTTTCCAACCCCATCTCCCGACCTGCACTACGGATGGCTGCCCGTAAACACATTGGTGATACTGGACTATTGGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTTGTGGCACTGAGCGATTTAGGCGGTGGTTTAACACCAAAGGAATCATGGAGTATTGGTTGGAGAGTGCTAGCCTAGATAAGGTCCGCCAGGATGCTGGGGTGCAGGACCCATTCTGGATTCCACCATCTACATTTCAAGCAGGCAGTCCCCCTCCTCAGAATTCTGGTTCTTCTGGCGAACTGAAATTACTTCAAATAGAAATGGCCAAAATGAAGAGAGATATGGAGGAGCTCATAAACAAGAACCAAGAGCAAAATGAAATTAATATGATGGAGGAGACACACAAGGAATTAGTAAAGTGGAAAGCTATGACTGAGCAACGCCTAACTGGGATTTCATCTTCTTTGAAGGGTGTACAGGGCATGTATAGTGATTTGGTAAGTTGGAAAAGTAAAGTTGAGCAACAGCTTGTAGAAATAACAAATAAATTGAGTGATCAGAAATCATCAAGGGAAGGCACGACCAATCCTCCTCTAGAACGGTGGGAAGATTGGCTTGAAAGCTCCAATCTAGAGAATATTCCGGGAGACATTGAGTTTTTACCATGGTTTGGGAGTACAGAGCTGGTTAATCTCGAGCAAGAAGCTGCCTTCCAAGATCCTAACTCAGCTCTACCTAGTCAGCTGCTCAATGACAATACGACTAACATAAAGAGTGATTTTCTGGAAATGTTGCCCAACAAACAAGAGGAAGATCAACCTAACGTGACTCCGGATTCTTCTGTGACTGTTAATTCAAAGTCAGACCTTGACAACTCGGTGATGCTGTTTCAGGAGATGCTCACGGACTTGCTTAAATGGAAAGACAAGGTGGAGAAGCAGATGGCCGAGTTATCAAATTTTGTATATGGAATGCTGGCCACCAATTAG	1305	0.4314	MDDCCHQVTGIGHHEENGKKLLLDIPKDLKDVEKTIKTETLFMPVFKKRKRLSRNQLIEMKAGLGGKQTQPSSKPKTKKHESTDRWSSERYQLAEQSMWEVLKAKGATFSNPISRPALRMAARKHIGDTGLLDHLLKHIDGKVAPCGTERFRRWFNTKGIMEYWLESASLDKVRQDAGVQDPFWIPPSTFQAGSPPPQNSGSSGELKLLQIEMAKMKRDMEELINKNQEQNEINMMEETHKELVKWKAMTEQRLTGISSSLKGVQGMYSDLVSWKSKVEQQLVEITNKLSDQKSSREGTTNPPLERWEDWLESSNLENIPGDIEFLPWFGSTELVNLEQEAAFQDPNSALPSQLLNDNTTNIKSDFLEMLPNKQEEDQPNVTPDSSVTVNSKSDLDNSVMLFQEMLTDLLKWKDKVEKQMAELSNFVYGMLATN	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco13g0392	434	PANTHER	PROTEIN DYAD	6	432	IPR044221	GO:0007131\|GO:0051177\|GO:0051321
	Acco13g0392	434	Coils	Coil	206	233	-	-
	Acco13g0392	434	MobiDBLite	consensus disorder prediction	59	88	-	-
	Acco13g0392	434	SUPERFAMILY	Myosin rod fragments	213	296	-	-
	Acco13g0392	434	MobiDBLite	consensus disorder prediction	74	88	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco13g0392	Acco-ChrAcco13	2798130	2800079	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco13g0392	85	169	PHD Transcription Factor Family	AT5G22260	43.023	4.88e-08	53.5