Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0391 ATGGGCAGATCTCCTTGCTGTGAGAAAGAGCACACCAACAAAGGCGCCTGGACCAAAGAGGAAGACCAACGCCTCATCAATTACATCAACCTCCATGGCGAGGGTTGCTGGCGATCCCTCCCCAGAGCTGCTGGTTTGCTCAGATGTGGTAAGAGTTGCAGACTCCGATGGATTAACTACCTCCGACCCGATCTCAAGCGAGGCAACTTCACTGAACAAGAAGACGAGCTCATCATCAACCTCCACAGCCTCCTTGGCAACAAATGGTCTTTGATCGCCGCGAGATTACCGGGCAGAACCGACAATGAGATCAAGAACTACTGGAACACCCACATCAAACGCAAACTCTACAGCCGCGGCATCGACCCTCAAACGCATCGACCCCTCAACGCCGCCGCTGCCACCGCCACCACCGATCCTGCCGCTGTCGTCAGCAGCAACAACAACAATAACGGCAAGTTTCAGTTAGTGACCGAATTGGGTAGCGCCAACAACAACAACAATGCCAAAAAGATCGTAAAAACCGAGTCTGCCGCCTGCGAAGACTCCAACAGCAGCAGTGGGGTCACCACATCAGAAGAAGCCACCTTTGCACAAGCTCCGCTCAACTTGGAGCTCACCATCGGCCTTCCCTCTGATCAGCCTGCTTCTTTGAACCAACATAACTTTAAAGGACATCCACAAGAAGACCACCAGCAACAACCTCGGTCAGAACAACAAGTCTTGTACCATTGGTTTGGCAACTTTAGTAGTAGTGCTCGTCATCAAGGTGTGTGCCTGTGTTACGGTCTAGGGTTTCAAAGTAAGGATCACGCATGTAGCTGCAAATTAGCCATGGGTGGTTCTGTTGTTGCTCCTGCTGCTCCTACCCCTCCAAATTCTGTTACTGAAACTGCCACCGATAATATGTATAGATTTTACACGCCCTTGAATATTTAG 939 0.508 MGRSPCCEKEHTNKGAWTKEEDQRLINYINLHGEGCWRSLPRAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAAAATATTDPAAVVSSNNNNNGKFQLVTELGSANNNNNAKKIVKTESAACEDSNSSSGVTTSEEATFAQAPLNLELTIGLPSDQPASLNQHNFKGHPQEDHQQQPRSEQQVLYHWFGNFSSSARHQGVCLCYGLGFQSKDHACSCKLAMGGSVVAPAAPTPPNSVTETATDNMYRFYTPLNI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0391 312 CDD SANT 69 112 IPR001005 -
Acco13g0391 312 SMART sant 66 114 IPR001005 -
Acco13g0391 312 SMART sant 13 63 IPR001005 -
Acco13g0391 312 MobiDBLite consensus disorder prediction 211 238 - -
Acco13g0391 312 FunFam MYB-related transcription factor 13 66 - -
Acco13g0391 312 CDD SANT 16 61 IPR001005 -
Acco13g0391 312 Gene3D - 14 66 - -
Acco13g0391 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco13g0391 312 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco13g0391 312 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Acco13g0391 312 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco13g0391 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco13g0391 312 Gene3D - 68 135 - -
Acco13g0391 312 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Acco13g0391 312 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco13g0391 312 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 218 - -
Acco13g0391 312 FunFam Myb transcription factor 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0391 Acco-ChrAcco13 2781667 2782806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0391 1 211 MYB Transcription Factor Family AT2G16720 60.930 6.56e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g0391 Myb_DNA-binding 1.5e-14 CL0123