Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0390 ATGGAGTTCGGATCCTCTCAATATCTTTATTCTCAGCATCTCTTAGAAGCTGAAAGTCTGGGTACTGGGCACCAAAAAAAGAGCAAGCTTTGTGGGTGTGTGGACGGTCAAGATATAAGGATTTTGAGTGATGAGGAGACAACGCCGATGAGAATATCTGCTTCCAAAGCTATGCCTCTTCCTTCCCTGGAGCCATCAAGTGCCAATTTGGGAAACCCAGTGTTGGACGTTGGAGATCGATCATGGAGAAGGCACGATTCGTGGGGCTTTTCCTATTCCTGCTTATTCTCCTTGCTTCTCACTTTGAGGTCTAATATATATAAAATGAATGAATATGATGCAGAGGGGAGTAGGGTGGTAGAGGCAAGACACTGCGAGTCACAGAGCCATAGGTTCAAAGGAACGTGTGTGAGCCATCAGAACTGCGGCTCCGTCTGCCTCGTCGAAGGTTTCACCGGCGGCAAATGCCGCGGTTTCCAGCGCCGTTGCTTTTGCACCAAAGTTTGTTGA 510 0.4804 MEFGSSQYLYSQHLLEAESLGTGHQKKSKLCGCVDGQDIRILSDEETTPMRISASKAMPLPSLEPSSANLGNPVLDVGDRSWRRHDSWGFSYSCLFSLLLTLRSNIYKMNEYDAEGSRVVEARHCESQSHRFKGTCVSHQNCGSVCLVEGFTGGKCRGFQRRCFCTKVC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0390 169 Gene3D - 123 169 IPR036574 -
Acco13g0390 169 ProSitePatterns Gamma-thionins family signature. 123 146 IPR008176 GO:0006952
Acco13g0390 169 Pfam Gamma-thionin family 123 169 - -
Acco13g0390 169 PANTHER DEFENSIN-LIKE PROTEIN 1 96 166 - -
Acco13g0390 169 SMART gth_4 124 169 IPR003614 GO:0006952
Acco13g0390 169 PRINTS Purothionin signature 154 168 IPR008176 GO:0006952
Acco13g0390 169 PRINTS Purothionin signature 124 139 IPR008176 GO:0006952
Acco13g0390 169 CDD Knot1 134 166 IPR003614 GO:0006952
Acco13g0390 169 SUPERFAMILY Scorpion toxin-like 123 169 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0390 Acco-ChrAcco13 2774808 2776307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0390 116 169 Plant Defensins Gene Families AT2G02100 72.222 6.11e-22 82.8