Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0367 ATGCACAACCGCTTAAAAGGAAATTTGGAGAGGAGAAGAGGAGGAGGCGGAGGAGCCATGGGAGATGGCAATAGTGCCTCCGGCAACAATCGGTCTAACAACAATAACAGTAATAAGCCTGAGTGGCTACAACAGTACGATCTGATAGGGAAAATTGGGGAAGGTACCTATGGTCTTGTGTTCCTCGCAAGGATCAAGTCTGCAACGAATCGTGGAAAATCAATTGCCATCAAGAAATTCAAGCAGTCCAAGGATGGCGACGGAGTCTCTCCCACCGCTATCCGTGAAATTATGTTACTCAGGGAGATAACTCACGAAAATGTCGTGAAGCTTGTAAATGTTCACATCAATCATGCGGATATGTCTCTGTACCTTGCTTTTGATTATGCTGAACACGACCTTTATGAAATCATCCGTCATCACAGGGACAAAGTCAACCATTCTATTAATCAATATACTGTTAAATCATTACTTTGGCAGTTGCTCAACGGACTAAACTATCTCCATAGTAATTGGATAATTCATCGAGACCTTAAGCCATCGAATATATTGGTTATGGGTGAAGGAGAGGAACACGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAGGCCCCTTTAAAGCCTTTATCTGAAAATGGAGTTGTTGTTACCATATGGTATCGTGCACCCGAGTTGCTTCTTGGGGCAAAACATTATACCAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTGTTAACGCTAAAGCCACTGTTTCAAGGAGCAGAAGTTAAAGCCACACCTAATCCGTTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCACCCCACACTAGAAAAGTGGCCTACCCTAGCATATCTTCCCCATTGGCAATCAGATCTTCAGCATATACAAGGGCACAAATATGACAACACCAGCCTTTGTAATGTTGTCCACCTACCTCCAAAAAGTCCTGCTTATGATCTCCTATCAAAGATGCTTGAATATGATCCTCGAAAGCGGATAACAGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATGGAACCACTGCCTGGGCGGAATGCTCTTGTGCCCTGCCAACCTGGAGAGAAAATTGTGAATTATCCCACTCGTCCAGTTGACTCAACAATAGATTTTGAAGGGACAACCAATTTGCAACCTTCTCAACCGGTTTCATCTGGAAATGCTGTTTCTGGCGGCATGCCAGGTAGTCATTTACCAAATAGATCTGTCCCTCGGCCAATGAATGTTATGGGCATGCAGAGGATGCCACCTATGCAAGCTTATAATCTTGCATCCCAGGCAGGGATGGGCGGTGGAATGAATTCTGGCATCTCTATGTCACGAGGTGTTGCACAGGCTCATCAGCAGCAGCAGTTGAGAAGGAAAGATGGTGGAGTGCTGATGCCTGGATACCCTCCACAGCAAAAGTCAAGGCGTAACTAA 1479 0.4442 MHNRLKGNLERRRGGGGGAMGDGNSASGNNRSNNNNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPTLAYLPHWQSDLQHIQGHKYDNTSLCNVVHLPPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQPGEKIVNYPTRPVDSTIDFEGTTNLQPSQPVSSGNAVSGGMPGSHLPNRSVPRPMNVMGMQRMPPMQAYNLASQAGMGGGMNSGISMSRGVAQAHQQQQLRRKDGGVLMPGYPPQQKSRRN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0367 492 ProSitePatterns Protein kinases ATP-binding region signature. 52 79 IPR017441 GO:0005524
Acco13g0367 492 Gene3D Phosphorylase Kinase; domain 1 29 128 - -
Acco13g0367 492 Gene3D Transferase(Phosphotransferase) domain 1 129 371 - -
Acco13g0367 492 PANTHER CELL DIVISION PROTEIN KINASE 44 362 - -
Acco13g0367 492 Pfam Protein kinase domain 46 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0367 492 MobiDBLite consensus disorder prediction 1 39 - -
Acco13g0367 492 SUPERFAMILY Protein kinase-like (PK-like) 41 358 IPR011009 -
Acco13g0367 492 MobiDBLite consensus disorder prediction 459 492 - -
Acco13g0367 492 MobiDBLite consensus disorder prediction 393 410 - -
Acco13g0367 492 ProSiteProfiles Protein kinase domain profile. 46 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0367 492 MobiDBLite consensus disorder prediction 23 39 - -
Acco13g0367 492 CDD STKc_CDK8_like 45 356 - -
Acco13g0367 492 MobiDBLite consensus disorder prediction 393 423 - -
Acco13g0367 492 SMART serkin_6 46 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0367 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Acco13g0367 492 FunFam Putative cyclin-dependent kinase E-1 130 369 - -
Acco13g0367 492 FunFam Cyclin-dependent kinase e-1 34 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0367 Acco-ChrAcco13 2581100 2586865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0367 20 491 Core Cell Cycle Gene Families AT5G63610 76.261 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Acco13g0367 Pkinase 1.8e-68 CL0016