Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0364 ATGGTAAAGGAAGAAGTCAGCAATGATAGTTACTCAACTGCTGAGACCGGGGATTCAGAATCTCACTTTCAACATAGTCCTGAGAAGGAGACAGGCTGGGCGAGGATGAATTGTCGTGTGTGCCAGTGTGCTGAATCTGATAAGAGGGGAGATGCTGCTCTAGAATTTTTGGGCATTGCTCCAGTTTTAGAATCTGATGTAAGTAATGATGAAGAAAGGCCAGATTGTGAGGAAATTTCCAAAAATGCATCTCTTAAAAGAAGTGTGGGAAGTAAATCTGGGGTCGTGGAGTTTGTAAGCCCTGATGGAGAGGTTTTCATCTGCAAAACTGATTTAGAAATGGGTCTTTCTCATCGAGACACTCTCATTGAACTTGGCTGCTGTTGTAAAAATGACCTCGCTGCAGTACACTATGCTTGTGCTCTTAAATGGTTTGTCAATCATGGATCTACTGTCTGTGAAATATGTGGAAATGTGGCAAAAAATATCAGAATTGCTGACTTCAATAAGGTTGTCACTTCTTTGAAAGAATATGAAGCATTGAGGGAAAGAACTACCATTGGGCAGCCCAGTCTCGTTCAAGTTCATGCAAATACTGGTATAGATCCTGATGCTGTGGCTGCTATCAGGAGGCAACGGCTAAGTGAAATTGCACTATGGTTTTGTCCCCGTAATACCATTAACAACAACAATGCGGACACAGTCTCACCAGTTGTTTCTGAACAACCTTTAAATAGTGTTACCGAAGATGCTGCACCTGTTCAAAATCCTGCAACTAAATGGGCAGTGGAAGTTACTGGGATCCTGCTTGCTACTGGGCTACTTACTGTCACCCTTGCATGGCTCATAGCTCCTCGTGTTGGAAAGAAAACTGCAAGAAATGGTCTTCATATCCTACTTGGAGGTATCTGCGCTTTAACGGTTGTGGTTTTCTTCCGCTTTTTTGTGCTCACCAGAATCAAGTATGGACCTGCACGTTACTGGGCAATTTTGTTCATTTTCTGGTTTCTTGTGTTTGGAATATGGGCTTCACGGACACACAGTGCTCACACGACGTGA 1059 0.4315 MVKEEVSNDSYSTAETGDSESHFQHSPEKETGWARMNCRVCQCAESDKRGDAALEFLGIAPVLESDVSNDEERPDCEEISKNASLKRSVGSKSGVVEFVSPDGEVFICKTDLEMGLSHRDTLIELGCCCKNDLAAVHYACALKWFVNHGSTVCEICGNVAKNIRIADFNKVVTSLKEYEALRERTTIGQPSLVQVHANTGIDPDAVAAIRRQRLSEIALWFCPRNTINNNNADTVSPVVSEQPLNSVTEDAAPVQNPATKWAVEVTGILLATGLLTVTLAWLIAPRVGKKTARNGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFIFWFLVFGIWASRTHSAHTT 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0364 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 160 IPR013083 -
Acco13g0364 352 PANTHER ZINC FINGER, RING-CH-TYPE 10 319 - -
Acco13g0364 352 SMART ringv_2 107 157 IPR011016 GO:0008270
Acco13g0364 352 MobiDBLite consensus disorder prediction 1 20 - -
Acco13g0364 352 ProSiteProfiles Zinc finger RING-CH-type profile. 97 163 IPR011016 GO:0008270
Acco13g0364 352 SUPERFAMILY RING/U-box 121 159 - -
Acco13g0364 352 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0364 Acco-ChrAcco13 2574810 2577112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0364 24 342 C3H Transcription Factor Family AT5G08750 64.759 3.88e-143 408