Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0342 ATGATGAAAGAATGTTGTGAGGTTGAAGCAATAGGCATTCACTACAAGATCCGCACACAGAAAAACAATCTCTACTCTTTGAAACTTTTGAGGAAAACTCCACAACTGAATGAGGAAGAAGATAATGGTCAAACTCAAAAACCAGAAGAGGAAGCACAAAGATGCAGGGGAGTGAGACATGTACTCAAGGACGTGAACTTGCAAGCCAAGCCACAGGAAATTCTAGCCATAGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGATTCTTGCTGGTAAAGTCACTCCACAAAGTGGCTCTGTCTTAGTGAACCAGAAGCCTGCAGATAAAGCTCAGTTCAGCAAGATTTCAGGTTATGTTACACAAAAAGATACTCTATTTCCTTTACTTACCGTTGAAGAAACTTTGATGTTCAGTGCAAAGCTGAGGCTAAAACTCTCTCGAGAACAACTCTGCTCCAAGGTCAAGTCACTGATTCATGAACTAAGACTCAGCCATGTTTCTGGGACTCGCATTGGAGATGAAAGAGACCGTGGGATATCGGGCGGCGAGAGGCGGCGAGTTTCTATAGGTGTTGAAGTCATACACGATCCAAAGGTACTGATTCTGGATGAACCCACTTCTGGGCTTGATAGTACTTCTGCACTCCAAATCATTGATATGCTTAAGGTGATGGCTGACTCAAGGGGAAGAACTATCATCCTTAGTATCCATCAACCTGGGTTCAGAATAGTGGAGTTGTTTAGTTCTATATTATTGTTGGCCAATGGCTCTGTGTTACACCATGGGAATGTGGAGTTGCTGAGTGTAAATATGAGACTAATCGGTCTAGATCCTCCTCTTCACGTTAATGTAGTTGAATTTGCCATTGAATCTATAGAAACCATTCAGCAGCAACAAAAATGCAAACCAGTTCAGCATGAAACGCCCCCTCATTTTCTAGTAACTTGGCAACAAAAGAAATTTGAAGATGAGTGTAAAAGTGGTAGGTTTACCCTGCAACAGCTTTTTCAACAATCCAGTTTAACTGATAAGCAAGTTATCATCAATACGGGAATTGAATTCACTTGTGATTATGCAAATTCTAGAATAAGAGAAACTATGATTCTCACTCACAGGTTTTCCAAGAACATCTTTCGTACAAAGGAGCTATTTGCATTTAGGACAATTCAGATGCTCATGTCCGGGCTCATTCTGGGATCCATCTTTTGTAATCTTAAGGATGATCTAGTGGGAGCTGTAGAAACGGTGGGTCTATTTGCTTTCATACTAACATTTTTGTTAACAAGCACAATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACCTCATGTGGTAGCTACAGAGTATCATCTTATGCTATTGCCAATGGTCTTGTTTACTCGCCATTTCTACTCATCCTAGCCATTTTATTCTCTGTACCCTTATACTGGCTTGTGGGGCTGAACAGGAATTTCACATCATTTTTGTACTTCTTGCTGCTAATTTGGCTAATTCTATATACAGCAAATTCAATTGTGGTATGTTTAAGTGCTCTGGTGCCTAATTTTATTGTTGGGAACTCAGTGATCAGTGGAGTGATAGGATCATTCTTCTTGTTCTCAGGCTACTTCATATCAAAGAACGAAATCCCAAAGTGCTGGATTTTCATGCACTATATATCTCTGTTTAAGTACCCCTTTGAAGGTTTTCTGATAAATGAGTTCTCCCACTCAAGAAAGTGCTTGGGGTACGTGTTTGGGTCATGTATGGTGACTGGAGCGAGTGTGCTTAAAGAAGAAGAATATGGTGAGGAAAGTAGTAGGTGGAAAAACGTGGGGGTCATGGTTTGCTTCATCCTGTTCTACAGGTTCATTTCTTATGTAATTCTTAGATATAGATGCTCAAGAAGGGAAATTAAGAGCAGCGTCATCATCTGA 1944 0.4064 MMKECCEVEAIGIHYKIRTQKNNLYSLKLLRKTPQLNEEEDNGQTQKPEEEAQRCRGVRHVLKDVNLQAKPQEILAIVGPSGAGKSSLLEILAGKVTPQSGSVLVNQKPADKAQFSKISGYVTQKDTLFPLLTVEETLMFSAKLRLKLSREQLCSKVKSLIHELRLSHVSGTRIGDERDRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADSRGRTIILSIHQPGFRIVELFSSILLLANGSVLHHGNVELLSVNMRLIGLDPPLHVNVVEFAIESIETIQQQQKCKPVQHETPPHFLVTWQQKKFEDECKSGRFTLQQLFQQSSLTDKQVIINTGIEFTCDYANSRIRETMILTHRFSKNIFRTKELFAFRTIQMLMSGLILGSIFCNLKDDLVGAVETVGLFAFILTFLLTSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYSPFLLILAILFSVPLYWLVGLNRNFTSFLYFLLLIWLILYTANSIVVCLSALVPNFIVGNSVISGVIGSFFLFSGYFISKNEIPKCWIFMHYISLFKYPFEGFLINEFSHSRKCLGYVFGSCMVTGASVLKEEEYGEESSRWKNVGVMVCFILFYRFISYVILRYRCSRREIKSSVII 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0342 647 FunFam ABC transporter G family member 5 47 307 - -
Acco13g0342 647 SMART AAA_5 71 260 IPR003593 GO:0016887
Acco13g0342 647 Pfam ABC transporter 62 210 IPR003439 GO:0005524
Acco13g0342 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 283 IPR003439 GO:0005524
Acco13g0342 647 Pfam ABC-2 type transporter 369 577 IPR013525 GO:0016020|GO:0140359
Acco13g0342 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 270 IPR027417 -
Acco13g0342 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 627 - -
Acco13g0342 647 Gene3D - 53 354 IPR027417 -
Acco13g0342 647 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0342 Acco-ChrAcco13 2379250 2381193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0342 61 294 Calmodulin-binding Proteins AT2G36910 26.531 5.16e-11 64.3