Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0340 ATGGCAGATGGAAGCGTCAACCTTCCTCCTGGGTTTCACTTCTCTCCAACGGATGAAGAACTTGTCCTTCACTTTCTATACAGCAAAGTTTCTCTCTTACCGTGCCATCCTAACATCATCCCTGATCTTGATATTTCTGTGTCTGATCCTTGGGAATTAAAGGGTAAGGCGTTGTCAAGTGGAAATCAATACTATTTCTTCACAAAAGTGAACGAGAACAGAACCACACAAAGTGGGTATTGGAGAGAAATAGGACTCACTGATTCTATTGTCTCGGCCGCTGACAAGAAAGTAGGAATCAAGAAGTACCTTGTATTCAACATAGGAGAAGCTTCAGAAGGCACTGAAACCAGCTGGATAATGCAAGAGTATCAGTTTTGCTCATCAGGGTGTAACACTGCATCACATAGAAGTACCAGAGGAAGAAGAAAATCGGATCAGAGCCAGAGCGAATGGGCTTTATGCCGCGTTTATGAAAGAAACAGAGACTCTCAACAAAAAATGAACTGCTATGATGATGATGATGATGATGATGAAGATGACAGCAGAACAGAGTTGTCATGGCTGGACGAAGTTTTTTGGTCGTTGGATGATGATCTTGAAGAAATTAACCTGACTTATTATTAG 627 0.4163 MADGSVNLPPGFHFSPTDEELVLHFLYSKVSLLPCHPNIIPDLDISVSDPWELKGKALSSGNQYYFFTKVNENRTTQSGYWREIGLTDSIVSAADKKVGIKKYLVFNIGEASEGTETSWIMQEYQFCSSGCNTASHRSTRGRRKSDQSQSEWALCRVYERNRDSQQKMNCYDDDDDDDEDDSRTELSWLDEVFWSLDDDLEEINLTYY 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0340 208 PANTHER NAC TRANSCRIPTION FACTOR 56 8 175 - -
Acco13g0340 208 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Acco13g0340 208 Pfam No apical meristem (NAM) protein 9 125 IPR003441 GO:0003677|GO:0006355
Acco13g0340 208 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Acco13g0340 208 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0340 Acco-ChrAcco13 2362937 2363784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0340 1 168 NAC Transcription Factor Family AT1G61110 37.853 1.16e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco13g0340 NAM 1e-25 No_clan