Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0331 ATGTCGCTTTCGCAAGGCAAAAAGATGACTAGGGAGGCGAATAAAGAACGATGTGGATTTAAACAGCTTCAGCAATTGATATGCGAGGGAAGAATGTCCAGAAGCAATAGCAGTGAGAGTAAGACTTGTAACAGAGGCCATTGGAGACCAGCTGAAGATGAGAGACTGAAACAGCTTGTGGCACAGTACGGTCCCCAGAACTGGAATTTCATTGCAGAACATCTTGATGGTAGATCAGGGAAAAGTTGCAGATTGAGGTGGTACAACCAACTAGACCCAAACATAGTGAAAAGGCCATTCACAGAGGAGGAGGAAGAAATACTATTAGCTCTTCACAAGGTTAAAGGAAACAGATGGGCTGCAATTTCAAGGTTCTTGCCTGGAAGAACTGATAATTCTGTCAAGAATCACTTCCATGTCCTTATGGCGAGAAGAAAGAGAGAACGTTTCGCACTATTTGGCGACAGAAGCATCAACCACAACACTAGTGTTAACCATAATCATAGGCCTGCCTCAGGGATTAACAACTTCACGTTCCAAAACAACAGAAACTTGGGAATCTTCGATCTGAATCCTTGGAATACTCAAAGTGATACTTCGACCATCTCATCAAAGTTACTGAGTTTTGAAGCTTCTGGTAATGCTGCTAATAATAATAAGTCCCACATCGATCACTTTATTAATGCTTCAAGTCCTGTTGCTTCTTGTTCACTTGGAAGTTATAAAAGTTTCACAGCCCCAGGATTTCCCAGTATTGGTAAGGTCGTTCCTCTTCCTCAGAAGTTTTCAAAACCTTATTTTGCCCAAAGAACAGAGGATTATTCCATCAAAGGCATGATGACAGACAAGATAACTCTGGAAGAACAAGTTGAAAAGCTTAAGGATATTTCCTTTATAGACTTTCTTGGTGTGGGAAGTTGTTCATCCAGCGACAGTTGA 939 0.4143 MSLSQGKKMTREANKERCGFKQLQQLICEGRMSRSNSSESKTCNRGHWRPAEDERLKQLVAQYGPQNWNFIAEHLDGRSGKSCRLRWYNQLDPNIVKRPFTEEEEEILLALHKVKGNRWAAISRFLPGRTDNSVKNHFHVLMARRKRERFALFGDRSINHNTSVNHNHRPASGINNFTFQNNRNLGIFDLNPWNTQSDTSTISSKLLSFEASGNAANNNKSHIDHFINASSPVASCSLGSYKSFTAPGFPSIGKVVPLPQKFSKPYFAQRTEDYSIKGMMTDKITLEEQVEKLKDISFIDFLGVGSCSSSDS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0331 312 FunFam MYB transcription factor 45 96 - -
Acco13g0331 312 SUPERFAMILY Homeodomain-like 44 138 IPR009057 -
Acco13g0331 312 ProSiteProfiles Myb-like domain profile. 92 142 IPR001005 -
Acco13g0331 312 CDD SANT 48 89 IPR001005 -
Acco13g0331 312 Gene3D - 99 169 - -
Acco13g0331 312 CDD SANT 107 142 IPR001005 -
Acco13g0331 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 146 IPR017930 -
Acco13g0331 312 PANTHER MYB PROTEIN-RELATED 45 198 - -
Acco13g0331 312 Gene3D - 45 96 - -
Acco13g0331 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 95 IPR017930 -
Acco13g0331 312 ProSiteProfiles Myb-like domain profile. 40 91 IPR001005 -
Acco13g0331 312 Pfam Myb-like DNA-binding domain 97 141 IPR001005 -
Acco13g0331 312 Pfam Myb-like DNA-binding domain 45 91 IPR001005 -
Acco13g0331 312 SMART sant 96 144 IPR001005 -
Acco13g0331 312 SMART sant 44 93 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0331 Acco-ChrAcco13 2312469 2316028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0331 32 308 MYB Transcription Factor Family AT4G33450 45.035 2.57e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g0331 Myb_DNA-binding 8.5e-16 CL0123