Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0312 ATGGATATCAACCAAAACCCTACAATGTTCACAAGCGTTAACAACACTACCATTTGGAATAATCTGAACAATATGGAAATGGATCACAATCTCCATCATCTTCATCATCAAATCCCTATGTGTTCCTCTTGGCCTAATTACCATAATTACCCTCATCAGATCATCATACCCTCTTCTTCTTCTTCCTCCACCACAATACCCCCTTCAGGGTTTCTAAACAACATCGTTTTGGAAGAAGAAGAAGACGGAGAAGGAGAGGGAGAAGGAGAAGAAGAAGAGCTGGGAGCTGTGAAGGAGATGCTGTACAAGATCGCGGCTATGCAACCGGTGGACATAGACCCGGCCACCATCCGAAAGCCAAAGAGACGAAATGTCAGAATCAGCGACGATCCACAAAGCGTCGCCGCCAGACACCGGCGAGAGAGGATCAGCGAGAAGATCCGAATCCTCCAAAGACTTGTCCCTGGTGGCACCAAGATGGACACTGCCTCCATGCTTGATGAAGCCATTCGCTATGTCAAGTTCTTAAAGCGACAAATTAGGCTTCTTCGATCTCAACCTCCACCACCACCACAACAACAACAATGCATCACTAATAACAATACTCTTGCCAATATGGGTGTTATCAGCACGGTTAGTACTAATATCCATAGTGATCATTGGCCTTTTGCACCACAGTCGTCTTTACTACACTGCCCCACCTCCACCTCCTCCGCTGCTGCTGCCATGGGCATGCCGGTCAGACTAGGACTCGGCTCGGGCTATAATCATGAGTGA 777 0.4749 MDINQNPTMFTSVNNTTIWNNLNNMEMDHNLHHLHHQIPMCSSWPNYHNYPHQIIIPSSSSSSTTIPPSGFLNNIVLEEEEDGEGEGEGEEEELGAVKEMLYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLRSQPPPPPQQQQCITNNNTLANMGVISTVSTNIHSDHWPFAPQSSLLHCPTSTSSAAAAMGMPVRLGLGSGYNHE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0312 258 CDD bHLH_AtIND_like 128 185 - -
Acco13g0312 258 Coils Coil 166 186 - -
Acco13g0312 258 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 28 207 IPR045843 GO:0003700|GO:0006355
Acco13g0312 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
Acco13g0312 258 Pfam Helix-loop-helix DNA-binding domain 137 176 IPR011598 GO:0046983
Acco13g0312 258 Gene3D - 130 196 IPR036638 GO:0046983
Acco13g0312 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 192 IPR036638 GO:0046983
Acco13g0312 258 SMART finulus 133 182 IPR011598 GO:0046983
Acco13g0312 258 FunFam BHLH transcription factor 130 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0312 Acco-ChrAcco13 2212679 2213455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0312 94 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 83.636 7.43e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco13g0312 HLH 1.3e-06 No_clan