Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0309 ATGGCCTACTCTCCTCTTTCTTTCATCTTCCTTCTCATCTCCCTCTCCTCCATTATTGCCAGTGCCTCCCCCTCCGTCCAACGCGCATGTGATGCCACGCGCTTCCCCCAAGAATGCCTTAATGGCCTCCCTCTCAATTCCACTACCTCTCTTCAAATCATCCAATCCGCCATCGCCGTCTCCGCCGACAACCTTAAGACTGCTAAATCCAAGATCAAGTCCATCCTCGACTCCTTGCCCGACGACGGTGACCATCTCAACCGCACCAGGGCCGCCGAGACCTGCCTCGCTATCCTCCATGACTCCGAGTATCGCATTTCCCTCGTCAACGACGCCCTCCCGGACTGCAACAAGATCAAGGACGCACGCGCGTGGATGAGCGCTGCATTGGCCTACCAATCCGACTGCTCGTCGGGGTTGAATTACGTATACGGAAACGACGCCGTCTCCATCAACGACACGCTGGTCTTCCTGGACACCCTCACGAGATACTCCAGCAACGCGTTGAGCATGATGGTGTCGTACGACGTGTTTGGCAGCAATACGACGTCGTGGAAGGCGCCCAGGACGGAGCGCGATGGCTTCTGGGAGCCACCGTCGAGAAAAGCGATGGGGTTTGGGCACAAGGGCGGGTTTCCGTTGGATTTGAAGGTGGACGTTACGGTTTGTAAGGAAAAAGAGTGTGATTACCAGACAGTGCAGGAAGCCGTTAATGCCGCTCCGGATCACAGTGAAGGGAGGTTCGTGATATATATTAGAAAAGGGATTTACAATGAAACGGTTAGGATTGCGATAGAGAAGAAGAACGTGATATTCTTAGGCGATGGAATGAGGAAGACCATTATCACTGGATCTGCACACGTAGGTCAGCCTGGGATCACCACCTACAATTCCGCTACCGTCGGAGTTCTTGGCGATGGATTCATGGCGAAGAATCTGACAATCCAAAACACAGCAGGATCCGATGCTCACCAAGCAGTGGCCTTCAGATCAGACAGCGATCTCTCTGTTCTTGAAAACGTAGAATTCATAGGGAATCAAGACACCCTATACGCTCATACCCTGCGTCAATTCTACAAATCATGTCGCATCCAAGGCAACGTCGACATGATCTTCGGAAACGCGGCGGCGTTTTTCCAAGAGTGCGCCGTCGTACTGAGTGAAAGGCAGAGCAACCCAGAAACAGGGGAGACCAACGCCGTGACGGCGCATGGAAGAACAGACCCAGCACAATCCACAGGCTTTGTATTTTATAACTGCGTGGTGACAGGGACCAAGGATTACATGGCACAGTACATGAAGAAGCCAGAGGTGCACAGGAACTTCTTGGGGAGGCCATGGAAGGTGTATTCAAGAACCGTGTTCATTCATTCTGTGTTTGAAACTCTCATCTCGCCGGAGGGTTGGATGGTCTGGGACGGTGATTTGGGTCTGAACACACTTTATTATGGGGAGAGCAACAATACTGGACCTGGTTCTGATCGGAGTCGGAGGGTGGTCTGGAGTAGTGAAATTCCCGGCCAACATGTGCCGGTGTATTCGGTGGACAACTTCATTCAGGGCAGTGATTGGATTCCATCCTATCAGCCAAGTCATCGGTAG 1602 0.5243 MAYSPLSFIFLLISLSSIIASASPSVQRACDATRFPQECLNGLPLNSTTSLQIIQSAIAVSADNLKTAKSKIKSILDSLPDDGDHLNRTRAAETCLAILHDSEYRISLVNDALPDCNKIKDARAWMSAALAYQSDCSSGLNYVYGNDAVSINDTLVFLDTLTRYSSNALSMMVSYDVFGSNTTSWKAPRTERDGFWEPPSRKAMGFGHKGGFPLDLKVDVTVCKEKECDYQTVQEAVNAAPDHSEGRFVIYIRKGIYNETVRIAIEKKNVIFLGDGMRKTIITGSAHVGQPGITTYNSATVGVLGDGFMAKNLTIQNTAGSDAHQAVAFRSDSDLSVLENVEFIGNQDTLYAHTLRQFYKSCRIQGNVDMIFGNAAAFFQECAVVLSERQSNPETGETNAVTAHGRTDPAQSTGFVFYNCVVTGTKDYMAQYMKKPEVHRNFLGRPWKVYSRTVFIHSVFETLISPEGWMVWDGDLGLNTLYYGESNNTGPGSDRSRRVVWSSEIPGQHVPVYSVDNFIQGSDWIPSYQPSHR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0309 533 SUPERFAMILY Pectin lyase-like 217 528 IPR011050 -
Acco13g0309 533 Gene3D - 214 532 IPR012334 -
Acco13g0309 533 FunFam Pectinesterase 4 216 532 - -
Acco13g0309 533 Pfam Plant invertase/pectin methylesterase inhibitor 25 171 IPR006501 GO:0004857
Acco13g0309 533 Pfam Pectinesterase 219 521 IPR000070 GO:0030599|GO:0042545
Acco13g0309 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 171 IPR035513 -
Acco13g0309 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 174 IPR035513 -
Acco13g0309 533 SMART PMEI_2 21 171 IPR006501 GO:0004857
Acco13g0309 533 CDD PMEI-like_3 29 172 - -
Acco13g0309 533 PANTHER PECTINESTERASE 13 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0309 Acco-ChrAcco13 2187495 2189903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0309 20 524 Carbohydrate Esterase AT5G09760 60.583 0.0 623