Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0300 ATGGCTGGCGTGGTTGCATCAAACATGGAATCCAAAGCCAAAAACGTTAGGGTAGGAGACTATATTCTGAAGACGAAAATCAGGGAAGGTTCTTTCTCCACAGTGTGGAGAGCCGAGCACGTTTTCAGCGGCGATGAAGTGGCAGTGAAACAAGTTTGCCTTTCCAGACTCAATCGACGCCTCAAGAGCAGCTTCGACTGCGAAATCGATTTCTTATCCTCTGTCAACCACCCTAATATAATTCGCCTTCTGGACGTCTTCCAGGAAGATGAATTTGTAAACCTGGTCCTGGAGTTTTGTGCTGGAGGAAATTTGGCTTCGTACATTCAGCGCCATGGGAGGGTTCAACAACAAATTGCCAGAAAATTCATGCAGCATATTGGTTCTGCTTTAAAAATAATGCACTATCGGGGTATCATTCACAGGGACCTGAAGCCAGAGAACATTTTGTTGTCAAGCCACGGGGATGATTCAGTGCTTAAGATTGCTGATTTTGGTCTATCAAGAACATTGCATCCCGGTGAATGTGCCGAGATCGTTTGTGGGTCTCCATTATACATGGCTCCTGAAGTTCTTCAATTCCAGAAATATGATGATAAGGCAGACATGTGGAGTGTTGGAGCCATTCTTTTTGAGCTTGTGATTGGCTATCCACCCTTCAATGGAAGAAATAATGTCCAGCTGTTGAAGAATATCAGATCCTGCGCACGTCTTCCATTTTCTCAACGAATCCTTTCAGCAGTAGACCCTGACTGTCTTGATATGTGTTCTAGGCTACTGTGCTTAAATCCAGAGGAGCGTCTATCTTTTGATGAATTTTATGGGCATAGGTTGTCCTTCTTCTCCCTCGGGACCAAATCAAAGAGGGCCTCGTCTCATCCAAAGGAGAGGAGCAAAGCAAAGGCTTTTCTGTATCACCACTTTGTCGCCGAGGGTGGTAATATGCAGTCCAAGATGGCTTTGGCTTATGCATATATACGCCAAGACGTGAGCAATTTCCTACCTCTTGAGCCATGTGTGTGTTTTTGTGCGTTTTCCCACTGCGGACTTCTATGA 1056 0.4517 MAGVVASNMESKAKNVRVGDYILKTKIREGSFSTVWRAEHVFSGDEVAVKQVCLSRLNRRLKSSFDCEIDFLSSVNHPNIIRLLDVFQEDEFVNLVLEFCAGGNLASYIQRHGRVQQQIARKFMQHIGSALKIMHYRGIIHRDLKPENILLSSHGDDSVLKIADFGLSRTLHPGECAEIVCGSPLYMAPEVLQFQKYDDKADMWSVGAILFELVIGYPPFNGRNNVQLLKNIRSCARLPFSQRILSAVDPDCLDMCSRLLCLNPEERLSFDEFYGHRLSFFSLGTKSKRASSHPKERSKAKAFLYHHFVAEGGNMQSKMALAYAYIRQDVSNFLPLEPCVCFCAFSHCGLL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0300 351 FunFam Maternal embryonic leucine zipper kinase 12 319 - -
Acco13g0300 351 Gene3D Transferase(Phosphotransferase) domain 1 11 332 - -
Acco13g0300 351 Pfam Protein kinase domain 23 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0300 351 ProSiteProfiles Protein kinase domain profile. 21 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0300 351 SMART serkin_6 21 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g0300 351 SUPERFAMILY Protein kinase-like (PK-like) 15 277 IPR011009 -
Acco13g0300 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Acco13g0300 351 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 11 279 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0300 Acco-ChrAcco13 2098726 2102041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0300 19 273 CBL-interacting serine-threonine protein kinases AT2G30360 37.786 1.15e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Acco13g0300 Pkinase 2e-67 CL0016