Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0296 ATGTATGCTTCTTCTTCTTCCTCCTCTAGCTCCCTGCTTCTCCAGGATCTTCTTGGGGATTTCCATTCCAGAAGGTTGCTCCTTTTCCACAACCCACTAATTAACTCACAGGCCAGTCCTCCGGCCTCCTTAAACACCCACAATTCGACGGATAAATACCTAGGAAATGTCAATTTCGATGCGAATGTTGTCATGGTGCTCTCTGTGTTGTTGTGTGCTCTCATTTGCTCGCTTGGCTTGAACTCCATCATAAGGTGTGCCTTGAGGTGTTCCAATCTGGTGGTCACCGTCGAGCCCGCCGCCGCCGGGAACAACCCTCCGGCAAGATTGGCCAACACTGGAGTGAAGAAGAAGGCTCTCAAGACTTTCCCCACTGTAAACTACTCCGCCGAGCTGAAGCTACCAGGTTTGGATACAGAGTGTGTGATATGCTTGTCAGAGTTCAGCAATGGCGAACGTGTCAGAATTTTGCCAAAGTGCAACCATGGCTTCCATATGAAGTGCATTGACAAGTGGCTGAGCTCACACTCGTCTTGTCCTAAGTGCAGGCAGTGCCTAATTCAAACTTGCCAGAAGATTGTTGGATGCACCACCCAGGCTAGCTCCTCCCAGCCACCTGAAACGATTGTTAGGATTGCGACTCTTGAACCAGAAGGTTTGGTCCGTAACTACAGGGAATTAAGCACTTGA 690 0.4957 MYASSSSSSSSLLLQDLLGDFHSRRLLLFHNPLINSQASPPASLNTHNSTDKYLGNVNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVVTVEPAAAGNNPPARLANTGVKKKALKTFPTVNYSAELKLPGLDTECVICLSEFSNGERVRILPKCNHGFHMKCIDKWLSSHSSCPKCRQCLIQTCQKIVGCTTQASSSQPPETIVRIATLEPEGLVRNYRELST 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0296 229 CDD RING-H2_EL5-like 140 183 - -
Acco13g0296 229 SMART ring_2 141 182 IPR001841 -
Acco13g0296 229 ProSiteProfiles Zinc finger RING-type profile. 141 183 IPR001841 -
Acco13g0296 229 Pfam Ring finger domain 140 183 IPR001841 -
Acco13g0296 229 SUPERFAMILY RING/U-box 119 188 - -
Acco13g0296 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 188 IPR013083 -
Acco13g0296 229 PANTHER RING-H2 FINGER PROTEIN ATL78 16 220 IPR044602 GO:0016567|GO:0016740
Acco13g0296 229 FunFam RING-H2 finger protein ATL73 104 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0296 Acco-ChrAcco13 2057857 2058546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0296 33 187 C3H Transcription Factor Family AT3G10910 46.914 5.47e-43 141